Paket: mmseqs2 (15-6f452+ds-2 och andra)

[ Källkod: mmseqs2  ]

ultra fast and sensitive protein search and clustering

MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge proteins/nucleotide sequence sets. MMseqs2 is open source GPL-licensed software implemented in C++ for Linux, MacOS, and (as beta version, via cygwin) Windows. The software is designed to run on multiple cores and servers and exhibits very good scalability. MMseqs2 can run 10000 times faster than BLAST. At 100 times its speed it achieves almost the same sensitivity. It can perform profile searches with the same sensitivity as PSI-BLAST at over 400 times its speed.

Andra paket besläktade med mmseqs2

• dep: libatomic1 (>= 4.8) [ej ppc64, ppc64el, sparc64, x32]

  support library providing __atomic built-in functions

• dep: libbz2-1.0

  high-quality block-sorting file compressor library - runtime

• dep: libc6 (>= 2.29) [hppa, m68k, ppc64, sparc64, x32]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

  dep: libc6 (>= 2.31) [sh4]

  dep: libc6 (>= 2.38) [amd64, arm64, mips64el, ppc64el, riscv64]

• dep: libc6.1 (>= 2.29) [alpha]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [arm64, ppc64, x32]

  GCC stödbibliotek

  dep: libgcc-s1 (>= 3.4) [alpha, amd64, mips64el, sh4]

  dep: libgcc-s1 (>= 3.4.4) [ppc64el]

  dep: libgcc-s1 (>= 4.2) [ia64]

  dep: libgcc-s1 (>= 4.3) [riscv64, sparc64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC stödbibliotek

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC stödbibliotek

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: libgzstream0 (>= 1.5+dfsg)

  provide functionality of zlib C-library in a C++ iostream

• dep: libstdc++6 (>= 13.1) [amd64, arm64, ia64, mips64el, ppc64el, riscv64]

  GNU standardbibliotek v3 för C++

  dep: libstdc++6 (>= 9) [ej amd64, arm64, ia64, mips64el, ppc64el, riscv64]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: libzstd1 (>= 1.3.8) [alpha, hppa, m68k, ppc64, sparc64]

  fast lossless compression algorithm

  dep: libzstd1 (>= 1.4.0) [sh4, x32]

• dep: zlib1g (>= 1:1.1.4) [ej amd64, arm64, ia64, mips64el, ppc64el, riscv64]

  Kompressionsbibliotek - körtidspaket

  dep: zlib1g (>= 1:1.2.6) [amd64, arm64, ia64, mips64el, ppc64el, riscv64]

Hämta mmseqs2

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
alpha (inofficiell anpassning)	12-113e3+ds-3+b1	4.605,9 kbyte	9.018,0 kbyte	[filförteckning]
amd64	15-6f452+ds-2+b1	23.684,5 kbyte	71.122,0 kbyte	[filförteckning]
arm64	15-6f452+ds-2+b1	6.968,4 kbyte	15.864,0 kbyte	[filförteckning]
hppa (inofficiell anpassning)	12-113e3+ds-2+b1	4.494,2 kbyte	7.857,0 kbyte	[filförteckning]
ia64 (inofficiell anpassning)	15-6f452+ds-2	7.602,6 kbyte	23.212,0 kbyte	[filförteckning]
m68k (inofficiell anpassning)	12-113e3+ds-2+b1	4.368,5 kbyte	7.775,0 kbyte	[filförteckning]
mips64el	15-6f452+ds-2+b1	6.933,1 kbyte	16.790,0 kbyte	[filförteckning]
ppc64 (inofficiell anpassning)	12-113e3+ds-2+b1	4.402,7 kbyte	8.061,0 kbyte	[filförteckning]
ppc64el	15-6f452+ds-2+b1	7.193,5 kbyte	17.208,0 kbyte	[filförteckning]
riscv64	15-6f452+ds-2+b2	7.321,3 kbyte	15.548,0 kbyte	[filförteckning]
sh4 (inofficiell anpassning)	12-113e3+ds-3+b1	4.800,2 kbyte	7.324,0 kbyte	[filförteckning]
sparc64 (inofficiell anpassning)	11-e1a1c+ds-4	4.158,7 kbyte	7.066,0 kbyte	[filförteckning]
x32 (inofficiell anpassning)	12-113e3+ds-3+b1	4.529,1 kbyte	7.777,0 kbyte	[filförteckning]