Paket: clustalx (2.1+lgpl-9 och andra)

[ Källkod: clustalx  ]

Multiple alignment of nucleic acid and protein sequences (graphical interface)

This package offers a GUI interface for the Clustal multiple sequence alignment program. It provides an integrated environment for performing multiple sequence- and profile-alignments to analyse the results. The sequence alignment is displayed in a window on the screen. A versatile coloring scheme has been incorporated to highlight conserved features in the alignment. For professional presentations, one should use the texshade LaTeX package or boxshade.

The pull-down menus at the top of the window allow you to select all the options required for traditional multiple sequence and profile alignment. You can cut-and-paste sequences to change the order of the alignment; you can select a subset of sequences to be aligned; you can select a sub-range of the alignment to be realigned and inserted back into the original alignment.

An alignment quality analysis can be performed and low-scoring segments or exceptional residues can be highlighted.

Märken: Biologi: Clustal/ALN, Proteiner, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, User Interface: Graphical User Interface, interface::x11, role::program, Scope: Utility, Interface Toolkit: Lesstif/Motif, uitoolkit::qt, use::analysing, Purpose: Comparing, use::viewing, works-with-format::plaintext, Works with: Behöver ett märke till, X Window System: Application

Andra paket besläktade med clustalx

• dep: libc6 (>= 2.34) [ej alpha, arm64, ia64, loong64, m68k, sh4, x32]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

  dep: libc6 (>= 2.37) [loong64, sh4]

  dep: libc6 (>= 2.38) [arm64, m68k, x32]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [amd64, arm64, i386, loong64, mips64el, ppc64, ppc64el, s390x, x32]

  GCC stödbibliotek

  dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sh4, sparc64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC stödbibliotek

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC stödbibliotek

• dep: libgl1 [sparc64]

  Vendor neutral GL dispatch library -- legacy GL support

• dep: libqt5core5t64 (>= 5.15.1) [amd64, i386, x32]

  Qt 5 core module

  dep: libqt5core5t64 (>= 5.7.0) [ej amd64, i386, x32]

• dep: libqt5gui5t64 (>= 5.2.0)

  Qt 5 GUI module

  eller libqt5gui5-gles (>= 5.2.0)

  Qt 5 GUI module — OpenGL ES variant

• dep: libqt5widgets5t64 (>= 5.0.2)

  Qt 5 widgets module

• dep: libqt5xml5t64 (>= 5.0.2)

  Qt 5 XML module

• dep: libstdc++6 (>= 13.1) [ej arm64]

  GNU standardbibliotek v3 för C++

  dep: libstdc++6 (>= 14) [arm64]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• sug: boxshade

  Pretty-printing of multiple sequence alignments

• sug: clustalw

  global multiple nucleotide or peptide sequence alignment

• sug: texlive-latex-extra

  TeX Live: LaTeX additional packages

Hämta clustalx

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
alpha (inofficiell anpassning)	2.1+lgpl-9+b1	405,8 kbyte	1.659,0 kbyte	[filförteckning]
amd64	2.1+lgpl-9+b1	445,0 kbyte	1.427,0 kbyte	[filförteckning]
arm64	2.1+lgpl-9+b2	393,4 kbyte	1.398,0 kbyte	[filförteckning]
armel	2.1+lgpl-9+b1	378,0 kbyte	1.262,0 kbyte	[filförteckning]
armhf	2.1+lgpl-9+b1	390,7 kbyte	962,0 kbyte	[filförteckning]
hppa (inofficiell anpassning)	2.1+lgpl-9+b1	419,9 kbyte	1.461,0 kbyte	[filförteckning]
i386	2.1+lgpl-9+b1	474,3 kbyte	1.470,0 kbyte	[filförteckning]
ia64 (inofficiell anpassning)	2.1+lgpl-9+b1	501,1 kbyte	2.574,0 kbyte	[filförteckning]
loong64 (inofficiell anpassning)	2.1+lgpl-9+b1	394,1 kbyte	1.386,0 kbyte	[filförteckning]
m68k (inofficiell anpassning)	2.1+lgpl-9+b1	424,5 kbyte	1.430,0 kbyte	[filförteckning]
mips64el	2.1+lgpl-9+b1	395,1 kbyte	1.726,0 kbyte	[filförteckning]
ppc64 (inofficiell anpassning)	2.1+lgpl-9+b1	423,6 kbyte	1.782,0 kbyte	[filförteckning]
ppc64el	2.1+lgpl-9+b1	428,8 kbyte	1.654,0 kbyte	[filförteckning]
riscv64	2.1+lgpl-9+b2	433,5 kbyte	1.130,0 kbyte	[filförteckning]
s390x	2.1+lgpl-9+b1	446,3 kbyte	1.470,0 kbyte	[filförteckning]
sh4 (inofficiell anpassning)	2.1+lgpl-9+b1	506,1 kbyte	1.336,0 kbyte	[filförteckning]
sparc64 (inofficiell anpassning)	2.1+lgpl-9+b1	356,6 kbyte	2.179,0 kbyte	[filförteckning]
x32 (inofficiell anpassning)	2.1+lgpl-9+b1	444,7 kbyte	1.342,0 kbyte	[filförteckning]