Пакет: trinityrnaseq (2.15.2+dfsg-1)

[ Источник: trinityrnaseq  ]

RNA-Seq De novo Assembly

Trinity represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data. Trinity combines three independent software modules: Inchworm, Chrysalis, and Butterfly, applied sequentially to process large volumes of RNA-seq reads. Trinity partitions the sequence data into many individual de Bruijn graphs, each representing the transcriptional complexity at a given gene or locus, and then processes each graph independently to extract full-length splicing isoforms and to tease apart transcripts derived from paralogous genes.

Другие пакеты, относящиеся к trinityrnaseq

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• dep: libc6 (>= 2.38)

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• dep: libhts3t64 (>= 1.17)

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• dep: zlib1g (>= 1:1.1.4)

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Архитектура	Размер пакета	В установленном виде	Файлы
amd64	1 696,9 Кб	7 531,0 Кб	[список файлов]
arm64	1 622,4 Кб	7 755,0 Кб	[список файлов]
ppc64el	1 672,4 Кб	8 267,0 Кб	[список файлов]
riscv64	1 663,5 Кб	6 803,0 Кб	[список файлов]