Pakket: twopaco (1.0.0+dfsg-1 en anderen)

[ Bron: twopaco  ]

build the compacted de Bruijn graph from many complete genomes

TwoPaCo is an implementation of the algorithm described in the paper "TwoPaCo: An efficient algorithm to build the compacted de Bruijn graph from many complete genomes".

This package contains two programs:

 twopaco: tool for direct construction of the compressed graph from
          multiple complete genomes
 graphdump: utility that turns output of twopaco into a text format

Andere aan twopaco gerelateerde pakketten

• dep: libc6 (>= 2.34)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libgcc-s1 (>= 3.0) [niet armhf, i386, riscv64]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.4) [riscv64]

  dep: libgcc-s1 (>= 3.5) [armhf]

  dep: libgcc-s1 (>= 4.2) [i386]

• dep: libstdc++6 (>= 11) [niet arm64, riscv64]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 13.1) [riscv64]

  dep: libstdc++6 (>= 14) [arm64]

• dep: libtbb12 (>= 2021.11.0) [riscv64]

  parallelism library for C++ - runtime files

  dep: libtbb12 (>= 2021.12.0) [arm64]

  dep: libtbb12 (>= 2021.4.0) [amd64]

  dep: libtbb12 (>= 2021.5.0) [niet amd64, arm64, riscv64]

• dep: libtbbmalloc2 (>= 2017~U7) [amd64]

  parallelism helper library for C++ - runtime files

  dep: libtbbmalloc2 (>= 2021.11.0) [riscv64]

  dep: libtbbmalloc2 (>= 2021.12.0) [arm64]

  dep: libtbbmalloc2 (>= 2021.5.0) [niet amd64, arm64, riscv64]

twopaco downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	1.0.0+dfsg-1	379,3 kB	1.616,0 kB	[overzicht]
arm64	1.0.0+dfsg-1+b1	352,7 kB	1.589,0 kB	[overzicht]
armhf	1.0.0+dfsg-1	349,1 kB	1.139,0 kB	[overzicht]
i386	1.0.0+dfsg-1	414,8 kB	1.810,0 kB	[overzicht]
mips64el	1.0.0+dfsg-1	330,2 kB	1.969,0 kB	[overzicht]
ppc64el	1.0.0+dfsg-1	370,0 kB	1.972,0 kB	[overzicht]
riscv64	1.0.0+dfsg-1+b1	375,4 kB	1.197,0 kB	[overzicht]
s390x	1.0.0+dfsg-1	341,1 kB	1.644,0 kB	[overzicht]