Package: twopaco (1.0.0+dfsg-1 and others)

[ Source: twopaco  ]

build the compacted de Bruijn graph from many complete genomes

TwoPaCo is an implementation of the algorithm described in the paper "TwoPaCo: An efficient algorithm to build the compacted de Bruijn graph from many complete genomes".

This package contains two programs:

 twopaco: tool for direct construction of the compressed graph from
          multiple complete genomes
 graphdump: utility that turns output of twopaco into a text format

Other Packages Related to twopaco

• dep: libc6 (>= 2.34)

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0) [not armhf, i386, riscv64]

  GCC támogató programkönyvtár

  dep: libgcc-s1 (>= 3.4) [riscv64]

  dep: libgcc-s1 (>= 3.5) [armhf]

  dep: libgcc-s1 (>= 4.2) [i386]

• dep: libstdc++6 (>= 11) [not arm64, riscv64]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 13.1) [riscv64]

  dep: libstdc++6 (>= 14) [arm64]

• dep: libtbb12 (>= 2021.11.0) [riscv64]

  parallelism library for C++ - runtime files

  dep: libtbb12 (>= 2021.12.0) [arm64]

  dep: libtbb12 (>= 2021.4.0) [amd64]

  dep: libtbb12 (>= 2021.5.0) [not amd64, arm64, riscv64]

• dep: libtbbmalloc2 (>= 2017~U7) [amd64]

  parallelism helper library for C++ - runtime files

  dep: libtbbmalloc2 (>= 2021.11.0) [riscv64]

  dep: libtbbmalloc2 (>= 2021.12.0) [arm64]

  dep: libtbbmalloc2 (>= 2021.5.0) [not amd64, arm64, riscv64]

Download twopaco

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
amd64	1.0.0+dfsg-1	379.3 kB	1,616.0 kB	[list of files]
arm64	1.0.0+dfsg-1+b1	352.7 kB	1,589.0 kB	[list of files]
armhf	1.0.0+dfsg-1	349.1 kB	1,139.0 kB	[list of files]
i386	1.0.0+dfsg-1	414.8 kB	1,810.0 kB	[list of files]
mips64el	1.0.0+dfsg-1	330.2 kB	1,969.0 kB	[list of files]
ppc64el	1.0.0+dfsg-1	370.0 kB	1,972.0 kB	[list of files]
riscv64	1.0.0+dfsg-1+b1	375.4 kB	1,197.0 kB	[list of files]
s390x	1.0.0+dfsg-1	341.1 kB	1,644.0 kB	[list of files]