Pakket: minimap (0.2-8 en anderen)

[ Bron: minimap  ]

tool for approximate mapping of long biosequences such as DNA reads

Minimap is an experimental tool to efficiently find multiple approximate mapping positions between two sets of long biological sequences, such as between DNA reads and reference genomes, between genomes and between long noisy reads. Minimap does not generate alignments as of now and because of this, it is usually tens of times faster than mainstream aligners. It does not replace mainstream aligners, but it can be useful when you want to quickly identify long approximate matches at moderate divergence among a huge collection of sequences. For this task, it is much faster than most existing tools.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: scope::utility, use::calculating, Works with: Biological Sequence

Andere aan minimap gerelateerde pakketten

• dep: libc6 (>= 2.34) [niet alpha, ia64, sh4]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: zlib1g (>= 1:1.1.4) [niet armel, armhf, hppa, m68k]

  compressiebibliotheek - programma's

  dep: zlib1g (>= 1:1.2.3.3) [armel, armhf, hppa, m68k]

minimap downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	0.2-8	25,7 kB	83,0 kB	[overzicht]
amd64	0.2-8+b2	26,3 kB	68,0 kB	[overzicht]
arm64	0.2-8+b1	24,3 kB	84,0 kB	[overzicht]
armel	0.2-8+b2	25,8 kB	67,0 kB	[overzicht]
armhf	0.2-8+b2	24,0 kB	51,0 kB	[overzicht]
hppa (unofficial port)	0.2-8+b1	28,2 kB	72,0 kB	[overzicht]
i386	0.2-8+b2	28,5 kB	67,0 kB	[overzicht]
ia64 (unofficial port)	0.2-8	32,4 kB	98,0 kB	[overzicht]
m68k (unofficial port)	0.2-8+b1	24,7 kB	59,0 kB	[overzicht]
mips64el	0.2-8+b2	25,6 kB	86,0 kB	[overzicht]
ppc64 (unofficial port)	0.2-8+b1	28,4 kB	84,0 kB	[overzicht]
ppc64el	0.2-8+b2	28,0 kB	84,0 kB	[overzicht]
riscv64	0.2-8+b2	25,5 kB	56,0 kB	[overzicht]
s390x	0.2-8+b2	27,9 kB	68,0 kB	[overzicht]
sh4 (unofficial port)	0.2-8	28,5 kB	82,0 kB	[overzicht]
sparc64 (unofficial port)	0.2-8+b1	22,9 kB	1.045,0 kB	[overzicht]
x32 (unofficial port)	0.2-8+b1	25,7 kB	63,0 kB	[overzicht]