Pakket: ltrsift (1.0.2-10 en anderen)

[ Bron: ltrsift  ]

postprocessing and classification of LTR retrotransposons

LTRsift is a graphical desktop tool for semi-automatic postprocessing of de novo predicted LTR retrotransposon annotations, such as the ones generated by LTRharvest and LTRdigest. Its user-friendly interface displays LTR retrotransposon candidates, their putative families and their internal structure in a hierarchical fashion, allowing the user to "sift" through the sometimes large results of de novo prediction software. It also offers customizable filtering and classification functionality.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, User Interface: Graphical User Interface, interface::x11, role::program, Scope: Utility, Interface Toolkit: GTK, Purpose: use::analysing, use::browsing, Comparing, Data Organisation, use::viewing, x11::application

Andere aan ltrsift gerelateerde pakketten

• dep: libc6 (>= 2.34) [niet alpha, ia64, sh4]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libcairo2 (>= 1.2.4)

  Cairo 2D vector graphics library

• dep: libgdk-pixbuf-2.0-0 (>= 2.22.0)

  GDK Pixbuf library

• dep: libgenometools0t64 (>= 1.6.5+ds)

  versatile genome analysis library

• dep: libglib2.0-0t64 (>= 2.75.3) [niet arm64]

  GLib library of C routines

  dep: libglib2.0-0t64 (>= 2.76.0) [arm64]

• dep: libgtk2.0-0t64 (>= 2.18.0)

  GTK graphical user interface library - old version

• dep: libpango-1.0-0 (>= 1.14.0)

  Layout and rendering of internationalized text

• rec: last-align

  genome-scale comparison of biological sequences

• rec: ncbi-blast+

  next generation suite of BLAST sequence search tools

ltrsift downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	1.0.2-10	92,6 kB	468,0 kB	[overzicht]
amd64	1.0.2-10	96,6 kB	364,0 kB	[overzicht]
arm64	1.0.2-10+b1	88,9 kB	465,0 kB	[overzicht]
armel	1.0.2-10	87,6 kB	326,0 kB	[overzicht]
armhf	1.0.2-10	87,5 kB	278,0 kB	[overzicht]
hppa (unofficial port)	1.0.2-10	91,3 kB	337,0 kB	[overzicht]
i386	1.0.2-10	106,3 kB	410,0 kB	[overzicht]
ia64 (unofficial port)	1.0.2-10	109,0 kB	561,0 kB	[overzicht]
m68k (unofficial port)	1.0.2-10	87,5 kB	334,0 kB	[overzicht]
mips64el	1.0.2-10	83,3 kB	479,0 kB	[overzicht]
ppc64 (unofficial port)	1.0.2-10	98,5 kB	528,0 kB	[overzicht]
ppc64el	1.0.2-10	98,0 kB	464,0 kB	[overzicht]
riscv64	1.0.2-10	95,9 kB	316,0 kB	[overzicht]
s390x	1.0.2-10	90,7 kB	364,0 kB	[overzicht]
sh4 (unofficial port)	1.0.2-10	106,9 kB	400,0 kB	[overzicht]
x32 (unofficial port)	1.0.2-10	97,8 kB	346,0 kB	[overzicht]