Pakket: ltrsift (1.0.2-9 en anderen)

[ Bron: ltrsift  ]

postprocessing and classification of LTR retrotransposons

LTRsift is a graphical desktop tool for semi-automatic postprocessing of de novo predicted LTR retrotransposon annotations, such as the ones generated by LTRharvest and LTRdigest. Its user-friendly interface displays LTR retrotransposon candidates, their putative families and their internal structure in a hierarchical fashion, allowing the user to "sift" through the sometimes large results of de novo prediction software. It also offers customizable filtering and classification functionality.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, User Interface: Graphical User Interface, interface::x11, role::program, Scope: Utility, Interface Toolkit: GTK, Purpose: use::analysing, use::browsing, Comparing, Data Organisation, use::viewing, x11::application

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• dep: libc6 (>= 2.17) [arm64, ppc64el]

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  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.7) [niet arm64, ppc64el]

• dep: libcairo2 (>= 1.2.4)

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  dep: libgenometools0 (>= 1.6.2+ds) [mips64el, mipsel]

• dep: libglib2.0-0 (>= 2.35.9)

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• dep: libpango-1.0-0 (>= 1.14.0)

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• rec: last-align

  genome-scale comparison of biological sequences

• rec: ncbi-blast+

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Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	1.0.2-9+b1	107,4 kB	378,0 kB	[overzicht]
arm64	1.0.2-9+b1	95,8 kB	366,0 kB	[overzicht]
armel	1.0.2-9+b1	94,5 kB	328,0 kB	[overzicht]
armhf	1.0.2-9+b1	95,3 kB	280,0 kB	[overzicht]
i386	1.0.2-9+b1	118,2 kB	440,0 kB	[overzicht]
mips64el	1.0.2-9+b1	87,6 kB	406,0 kB	[overzicht]
mipsel	1.0.2-9+b1	91,2 kB	417,0 kB	[overzicht]
ppc64el	1.0.2-9+b1	106,6 kB	514,0 kB	[overzicht]
s390x	1.0.2-9+b1	96,9 kB	382,0 kB	[overzicht]