Pakket: abyss (2.1.0-1) [debports]

[ Bron:  ]

de novo, parallel, sequence assembler for short reads

ABySS is a de novo, parallel, sequence assembler that is designed for short reads. It may be used to assemble genome or transcriptome sequence data. Parallelization is achieved using MPI, OpenMP and pthread.

Andere aan abyss gerelateerde pakketten

• dep: bsdmainutils

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• dep: libc6 (>= 2.11)

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  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libgcc4 (>= 4.1.1)

  Pakket niet beschikbaar

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• dep: libsqlite3-0 (>= 3.5.9)

  SQLite 3 shared library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: make

  utility for directing compilation

• dep: perl

  Larry Wall's Practical Extraction and Report Language

• sug: openmpi-bin

  high performance message passing library -- binaries

abyss downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
hppa (unofficial port)	2.719,4 kB	9.671,0 kB	[overzicht]