Pakket: cd-hit (4.8.1-4 en anderen)

Verwijzigingen voor cd-hit

Debian bronnen:

Het bronpakket cd-hit downloaden:

Beheerders:

Debian Med Packaging Team (QA-pagina, Mailarchief)
Tim Booth (QA-pagina)
Andreas Tille (QA-pagina)
Étienne Mollier (QA-pagina)

Externe bronnen:

Homepage [weizhongli-lab.org]

Vergelijkbare pakketten:

suite of programs designed to quickly group sequences

cd-hit contains a number of programs designed to quickly group sequences. cd-hit groups proteins into clusters that meet a user-defined similarity threshold. cd-hit-est is similar to cd-hit, but designed to group nucleotide sequences (without introns). cd-hit-est-2d is similar to cd-hit-2d but designed to compare two nucleotide datasets. A number of other related programs are also in this package. Please see the cd-hit user manual, also part of this package, for further information.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, implemented-in::perl, User Interface: Command Line, Role: role::program, use::comparing, Works with: Biological Sequence

Andere aan cd-hit gerelateerde pakketten

depends

recommends

suggests

enhances

dep: libc6 (>= 2.11) [hppa]

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb

dep: libc6 (>= 2.14) [amd64]

dep: libc6 (>= 2.16) [x32]

dep: libc6 (>= 2.17) [ppc64el]

dep: libc6 (>= 2.31) [sh4]

dep: libc6 (>= 2.34) [riscv64]

dep: libc6 (>= 2.38) [arm64]

dep: libc6 (>= 2.7) [armel, armhf, i386, m68k, mips64el, ppc64, s390x, sparc64]
dep: libc6.1 (>= 2.31) [ia64]

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6.1-udeb

dep: libc6.1 (>= 2.7) [alpha]
dep: libgcc-s1 (>= 3.0) [amd64, arm64, mips64el, ppc64, ppc64el, s390x, x32]

GCC support bibliotheek

dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sh4, sparc64]

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 4.2) [i386, ia64]
dep: libgcc-s2 (>= 4.2.1) [m68k]

GCC support bibliotheek
dep: libgcc-s4 (>= 4.1.1) [hppa]

GCC support bibliotheek
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library
dep: libstdc++6 (>= 13.1) [arm64, riscv64]

GNU Standard C++ Library v3

dep: libstdc++6 (>= 5.2) [niet arm64, riscv64]
dep: libunwind8 [ia64]

library to determine the call-chain of a program - runtime
dep: perl

Larry Wall's Practical Extraction and Report Language
dep: zlib1g (>= 1:1.1.4)

compressiebibliotheek - programma's

cd-hit downloaden

Pakket downloaden voor alle beschikbare platforms
Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	4.8.1-4	505,8 kB	1.531,0 kB	[overzicht]
amd64	4.8.1-4	510,3 kB	1.411,0 kB	[overzicht]
arm64	4.8.1-4+b1	496,6 kB	1.428,0 kB	[overzicht]
armel	4.8.1-4	491,0 kB	1.319,0 kB	[overzicht]
armhf	4.8.1-4	487,6 kB	1.111,0 kB	[overzicht]
hppa (unofficial port)	4.8.1-4	506,3 kB	1.398,0 kB	[overzicht]
i386	4.8.1-4	511,4 kB	1.477,0 kB	[overzicht]
ia64 (unofficial port)	4.8.1-4	525,4 kB	2.178,0 kB	[overzicht]
m68k (unofficial port)	4.8.1-4	506,1 kB	1.423,0 kB	[overzicht]
mips64el	4.8.1-4	510,9 kB	1.588,0 kB	[overzicht]
ppc64 (unofficial port)	4.8.1-4	509,0 kB	1.813,0 kB	[overzicht]
ppc64el	4.8.1-4	508,7 kB	1.813,0 kB	[overzicht]
riscv64	4.8.1-4+b1	505,5 kB	1.236,0 kB	[overzicht]
s390x	4.8.1-4	496,6 kB	1.429,0 kB	[overzicht]
sh4 (unofficial port)	4.8.1-4	510,8 kB	1.373,0 kB	[overzicht]
sparc64 (unofficial port)	4.8.1-4	489,5 kB	1.399,0 kB	[overzicht]
x32 (unofficial port)	4.8.1-4	506,8 kB	1.381,0 kB	[overzicht]