Pakket: cd-hit (4.8.1-4)

[ Bron: cd-hit  ]

suite of programs designed to quickly group sequences

cd-hit contains a number of programs designed to quickly group sequences. cd-hit groups proteins into clusters that meet a user-defined similarity threshold. cd-hit-est is similar to cd-hit, but designed to group nucleotide sequences (without introns). cd-hit-est-2d is similar to cd-hit-2d but designed to compare two nucleotide datasets. A number of other related programs are also in this package. Please see the cd-hit user manual, also part of this package, for further information.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, implemented-in::perl, User Interface: Command Line, Role: role::program, use::comparing, Works with: Biological Sequence

Andere aan cd-hit gerelateerde pakketten

• dep: libc6 (>= 2.14) [amd64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.7) [niet amd64, arm64, ppc64el]

• dep: libgcc-s1 (>= 3.0) [niet armel, armhf, i386, mipsel]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [i386, mipsel]

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: perl

  Larry Wall's Practical Extraction and Report Language

• dep: zlib1g (>= 1:1.1.4)

  compressiebibliotheek - programma's

cd-hit downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	510,3 kB	1.411,0 kB	[overzicht]
arm64	493,8 kB	1.309,0 kB	[overzicht]
armel	491,0 kB	1.319,0 kB	[overzicht]
armhf	487,6 kB	1.111,0 kB	[overzicht]
i386	511,4 kB	1.477,0 kB	[overzicht]
mips64el	510,9 kB	1.588,0 kB	[overzicht]
mipsel	511,2 kB	1.541,0 kB	[overzicht]
ppc64el	508,7 kB	1.813,0 kB	[overzicht]
s390x	496,6 kB	1.429,0 kB	[overzicht]