パッケージ: r-bioc-biovizbase (1.52.0-1 など)

r-bioc-biovizbase に関するリンク

Debian の資源:

r-bioc-biovizbase ソースパッケージをダウンロード:

メンテナ:

外部の資源:

ホームページ [bioconductor.org]

類似のパッケージ:

GNU R basic graphic utilities for visualization of genomic data

The biovizBase package is designed to provide a set of utilities, color schemes and conventions for genomic data. It serves as the base for various high-level packages for biological data visualization. This saves development effort and encourages consistency.

その他の r-bioc-biovizbase 関連パッケージ

依存

推奨

提案

enhances

dep: libc6 (>= 2.16) [x32]

GNU C ライブラリ: 共有ライブラリ
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb

dep: libc6 (>= 2.17) [arm64, ppc64el]

dep: libc6 (>= 2.2) [hppa, mips64el, s390x, sparc64]

dep: libc6 (>= 2.2.5) [amd64]

dep: libc6 (>= 2.27) [riscv64]

dep: libc6 (>= 2.3) [ppc64]
dep: libc6.1 (>= 2.1.3) [alpha]

GNU C ライブラリ: 共有ライブラリ
以下のパッケージによって提供される仮想パッケージでもあります: libc6.1-udeb

dep: libc6.1 (>= 2.37) [ia64]
dep: r-api-3 [sparc64]

パッケージは利用できません
dep: r-api-4.0 [sparc64 以外]

以下のパッケージによって提供される仮想パッケージです: r-base-core
dep: r-api-bioc-3.16 [x32]

パッケージは利用できません
dep: r-api-bioc-3.18 [hppa, ia64, sh4]

パッケージは利用できません
dep: r-api-bioc-3.19 [hppa, ia64, sh4, sparc64, x32 以外]

以下のパッケージによって提供される仮想パッケージです: r-bioc-biocgenerics
dep: r-base-core (>= 3.3.2-1) [sparc64]

GNU R core of statistical computation and graphics system

dep: r-base-core (>= 4.2.2.20221110-1) [x32]
dep: r-bioc-annotationdbi [hppa, ia64, sh4, sparc64, x32]

GNU R Annotation Database Interface for BioConductor

dep: r-bioc-annotationdbi (>= 1.66.0) [hppa, ia64, sh4, sparc64, x32 以外]
dep: r-bioc-annotationfilter (>= 0.99.8) [hppa, ia64, sh4, x32]

facilities for filtering Bioconductor annotation resources

dep: r-bioc-annotationfilter (>= 1.28.0) [hppa, ia64, sh4, sparc64, x32 以外]
dep: r-bioc-biocgenerics [hppa, ia64, sh4, sparc64, x32]

generic functions for Bioconductor

dep: r-bioc-biocgenerics (>= 0.50.0) [hppa, ia64, sh4, sparc64, x32 以外]
dep: r-bioc-biostrings (>= 2.33.11) [hppa, ia64, sh4, sparc64, x32]

GNU R string objects representing biological sequences

dep: r-bioc-biostrings (>= 2.72.1) [hppa, ia64, sh4, sparc64, x32 以外]
dep: r-bioc-ensembldb (>= 1.3.8) [sparc64]

GNU R utilities to create and use an Ensembl based annotation database

dep: r-bioc-ensembldb (>= 1.99.13) [hppa, ia64, sh4, x32]

dep: r-bioc-ensembldb (>= 2.28.0) [hppa, ia64, sh4, sparc64, x32 以外]
dep: r-bioc-genomeinfodb (>= 1.40.1) [hppa, ia64, sh4, sparc64, x32 以外]

BioConductor utilities for manipulating chromosome identifiers

dep: r-bioc-genomeinfodb (>= 1.5.14) [hppa, ia64, sh4, sparc64, x32]
dep: r-bioc-genomicalignments (>= 1.1.16) [hppa, ia64, sh4, sparc64, x32]

BioConductor representation and manipulation of short genomic alignments

dep: r-bioc-genomicalignments (>= 1.40.0) [hppa, ia64, sh4, sparc64, x32 以外]
dep: r-bioc-genomicfeatures (>= 1.21.19) [hppa, ia64, sh4, sparc64, x32]

GNU R tools for making and manipulating transcript centric annotations

dep: r-bioc-genomicfeatures (>= 1.56.0) [hppa, ia64, sh4, sparc64, x32 以外]
dep: r-bioc-genomicranges (>= 1.23.21) [hppa, ia64, sh4, sparc64, x32]

BioConductor representation and manipulation of genomic intervals

dep: r-bioc-genomicranges (>= 1.56.1) [hppa, ia64, sh4, sparc64, x32 以外]
dep: r-bioc-iranges (>= 1.99.28) [hppa, ia64, sh4, sparc64, x32]

GNU R low-level containers for storing sets of integer ranges

dep: r-bioc-iranges (>= 2.38.1) [hppa, ia64, sh4, sparc64, x32 以外]
dep: r-bioc-rsamtools (>= 1.17.28) [hppa, ia64, sh4, sparc64, x32]

GNU R binary alignment (BAM), variant call (BCF), or tabix file import

dep: r-bioc-rsamtools (>= 2.20.0) [hppa, ia64, sh4, sparc64, x32 以外]
dep: r-bioc-s4vectors (>= 0.23.19) [hppa, ia64, sh4, x32]

BioConductor S4 implementation of vectors and lists

dep: r-bioc-s4vectors (>= 0.42.1) [hppa, ia64, sh4, sparc64, x32 以外]

dep: r-bioc-s4vectors (>= 0.9.25) [sparc64]
dep: r-bioc-summarizedexperiment [hppa, ia64, sh4, sparc64, x32]

BioConductor assay container

dep: r-bioc-summarizedexperiment (>= 1.34.0) [hppa, ia64, sh4, sparc64, x32 以外]
dep: r-bioc-variantannotation (>= 1.11.4) [hppa, ia64, sh4, sparc64, x32]

BioConductor annotation of genetic variants

dep: r-bioc-variantannotation (>= 1.50.0) [hppa, ia64, sh4, sparc64, x32 以外]
dep: r-cran-dichromat

GNU R color schemes for dichromats
dep: r-cran-hmisc

GNU R miscellaneous functions by Frank Harrell
dep: r-cran-rcolorbrewer

GNU R package providing suitable color palettes
dep: r-cran-rlang [sparc64 以外]

Functions for Base Types and Core R and 'Tidyverse' Features
dep: r-cran-scales

Scale functions for visualization

sug: r-bioc-bsgenome [hppa, ia64, sh4, sparc64, x32]

BioConductor infrastructure for Biostrings-based genome data packages

sug: r-bioc-bsgenome (>= 1.72.0) [hppa, ia64, sh4, sparc64, x32 以外]
sug: r-bioc-rtracklayer [hppa, ia64, sh4, sparc64, x32]

GNU R interface to genome browsers and their annotation tracks

sug: r-bioc-rtracklayer (>= 1.64.0) [hppa, ia64, sh4, sparc64, x32 以外]
sug: r-cran-runit

GNU R package providing unit testing framework

r-bioc-biovizbase のダウンロード

すべての利用可能アーキテクチャ向けのダウンロード
アーキテクチャ	バージョン	パッケージサイズ	インストールサイズ	ファイル
alpha (非公式の移植版)	1.52.0-1	2,591.4 kB	3,128.0 kB	[ファイル一覧]
amd64	1.52.0-1	2,592.1 kB	3,077.0 kB	[ファイル一覧]
arm64	1.52.0-1	2,592.1 kB	3,129.0 kB	[ファイル一覧]
hppa (非公式の移植版)	1.50.0-1	2,600.4 kB	3,079.0 kB	[ファイル一覧]
ia64 (非公式の移植版)	1.50.0-1	2,600.8 kB	3,081.0 kB	[ファイル一覧]
mips64el	1.52.0-1	2,592.2 kB	3,129.0 kB	[ファイル一覧]
ppc64 (非公式の移植版)	1.52.0-1	2,592.2 kB	3,129.0 kB	[ファイル一覧]
ppc64el	1.52.0-1	2,592.4 kB	3,128.0 kB	[ファイル一覧]
riscv64	1.52.0-1	2,591.9 kB	3,069.0 kB	[ファイル一覧]
s390x	1.52.0-1	2,592.0 kB	3,069.0 kB	[ファイル一覧]
sh4 (非公式の移植版)	1.50.0-1	2,600.0 kB	3,139.0 kB	[ファイル一覧]
sparc64 (非公式の移植版)	1.22.0-2	2,478.3 kB	2,861.0 kB	[ファイル一覧]
x32 (非公式の移植版)	1.46.0-1	2,599.5 kB	3,087.0 kB	[ファイル一覧]