[ trixie ]
[ sid ]
[ experimental ]
[ Source: r-bioc-pwalign ]
Package: r-bioc-pwalign (1.0.0-2)
Links for r-bioc-pwalign
Debian Resources:
Download Source Package r-bioc-pwalign:
- [r-bioc-pwalign_1.0.0-2.dsc]
- [r-bioc-pwalign_1.0.0.orig.tar.gz]
- [r-bioc-pwalign_1.0.0-2.debian.tar.xz]
Maintainers:
External Resources:
- Homepage [bioconductor.org]
Similar packages:
Perform pairwise sequence alignments
The two main functions in the package are pairwiseAlignment() and stringDist(). The former solves (Needleman-Wunsch) global alignment, (Smith-Waterman) local alignment, and (ends-free) overlap alignment problems. The latter computes the Levenshtein edit distance or pairwise alignment score matrix for a set of strings.
Other Packages Related to r-bioc-pwalign
|
|
|
|
-
- dep: libc6 (>= 2.14) [amd64]
- GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.27) [riscv64]
- dep: libc6 (>= 2.4) [mips64el, ppc64, s390x, sparc64]
-
- dep: libc6.1 (>= 2.1.3) [alpha]
- GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6.1-udeb
-
- dep: r-api-4.0
- virtual package provided by r-base-core
-
- dep: r-api-bioc-3.19
- virtual package provided by r-bioc-biocgenerics
-
- dep: r-bioc-biocgenerics (>= 0.50.0)
- generic functions for Bioconductor
-
- dep: r-bioc-biostrings (>= 2.72.1)
- GNU R string objects representing biological sequences
-
- dep: r-bioc-iranges (>= 2.38.1)
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-s4vectors (>= 0.42.1)
- BioConductor S4 implementation of vectors and lists
-
- dep: r-bioc-xvector (>= 0.44.0)
- BioConductor representation and manpulation of external sequences
-
- sug: r-cran-runit
- GNU R package providing unit testing framework
Download r-bioc-pwalign
Architecture | Package Size | Installed Size | Files |
---|---|---|---|
alpha (unofficial port) | 736.2 kB | 1,142.0 kB | [list of files] |
amd64 | 737.3 kB | 1,103.0 kB | [list of files] |
arm64 | 735.8 kB | 1,143.0 kB | [list of files] |
mips64el | 734.3 kB | 1,151.0 kB | [list of files] |
ppc64 (unofficial port) | 739.3 kB | 1,207.0 kB | [list of files] |
ppc64el | 737.8 kB | 1,143.0 kB | [list of files] |
riscv64 | 736.6 kB | 1,087.0 kB | [list of files] |
s390x | 737.0 kB | 1,107.0 kB | [list of files] |
sparc64 (unofficial port) | 732.3 kB | 2,039.0 kB | [list of files] |