[ Source: libbio-db-hts-perl ]
Package: libbio-db-hts-perl (3.01-5 and others)
Links for libbio-db-hts-perl
Debian Resources:
Download Source Package libbio-db-hts-perl:
- [libbio-db-hts-perl_3.01-5.dsc]
- [libbio-db-hts-perl_3.01.orig.tar.gz]
- [libbio-db-hts-perl_3.01-5.debian.tar.xz]
Maintainers:
External Resources:
- Homepage [metacpan.org]
Similar packages:
Perl interface to the HTS library
HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.
HTSlib implements a generalized BAM (binary SAM) index, with file extension 'csi' (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.
This package provides a Perl interface to the HTS library.
Other Packages Related to libbio-db-hts-perl
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- dep: libbio-perl-perl
- BioPerl core perl modules
-
- dep: libc6 (>= 2.14) [amd64]
- GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.16) [x32]
- dep: libc6 (>= 2.17) [arm64]
- dep: libc6 (>= 2.22) [ppc64, ppc64el]
- dep: libc6 (>= 2.27) [riscv64]
- dep: libc6 (>= 2.3.4) [hppa]
- dep: libc6 (>= 2.4) [armel, armhf, i386, m68k, mips64el, s390x, sparc64]
- dep: libc6 (>= 2.40) [sh4]
-
- dep: libc6.1 (>= 2.37) [ia64]
- GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6.1-udeb
- dep: libc6.1 (>= 2.4) [alpha]
-
- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
-
- dep: perl (>= 5.38.2-3.2) [ia64]
- Larry Wall's Practical Extraction and Report Language
- dep: perl (>= 5.40.0-6) [not ia64]
-
- dep: perlapi-5.38.2 [ia64]
- virtual package provided by perl-base
-
- dep: perlapi-5.40.0 [not ia64]
- virtual package provided by perl-base
-
- dep: zlib1g (>= 1:1.2.3.3)
- tömörítő könyvtár - futásidejű
Download libbio-db-hts-perl
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| alpha (unofficial port) | 3.01-5 | 134.8 kB | 542.0 kB | [list of files] |
| amd64 | 3.01-5 | 139.1 kB | 428.0 kB | [list of files] |
| arm64 | 3.01-5 | 133.7 kB | 477.0 kB | [list of files] |
| armel | 3.01-5 | 135.2 kB | 415.0 kB | [list of files] |
| armhf | 3.01-5 | 134.5 kB | 375.0 kB | [list of files] |
| hppa (unofficial port) | 3.01-5 | 137.3 kB | 457.0 kB | [list of files] |
| i386 | 3.01-5 | 140.9 kB | 447.0 kB | [list of files] |
| ia64 (unofficial port) | 3.01-4+b3 | 145.4 kB | 615.0 kB | [list of files] |
| m68k (unofficial port) | 3.01-5 | 134.2 kB | 427.0 kB | [list of files] |
| mips64el | 3.01-5 | 129.6 kB | 548.0 kB | [list of files] |
| ppc64 (unofficial port) | 3.01-5 | 136.9 kB | 541.0 kB | [list of files] |
| ppc64el | 3.01-5 | 136.6 kB | 540.0 kB | [list of files] |
| riscv64 | 3.01-5 | 139.5 kB | 403.0 kB | [list of files] |
| s390x | 3.01-5 | 139.3 kB | 441.0 kB | [list of files] |
| sh4 (unofficial port) | 3.01-5 | 140.5 kB | 475.0 kB | [list of files] |
| sparc64 (unofficial port) | 3.01-5 | 131.5 kB | 2,338.0 kB | [list of files] |
| x32 (unofficial port) | 3.01-5 | 139.1 kB | 423.0 kB | [list of files] |