Package: hilive (2.0a-4 and others)

[ Source: hilive  ]

realtime alignment of Illumina reads

HiLive is a read mapping tool that maps Illumina HiSeq (or comparable) reads to a reference genome right in the moment when they are produced. This means, read mapping is finished as soon as the sequencer is finished generating the data.

Other Packages Related to hilive

• dep: libboost-atomic1.83.0 (>= 1.83.0) [sparc64]

  atomic data types, operations, and memory ordering constraints

• dep: libboost-filesystem1.83.0 (>= 1.83.0)

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-iostreams1.83.0 (>= 1.83.0) [sparc64]

  Boost.Iostreams Library

• dep: libboost-program-options1.83.0 (>= 1.83.0)

  program options library for C++

• dep: libboost-system1.83.0 (>= 1.83.0) [sparc64]

  Operating system (e.g. diagnostics support) library

• dep: libc6 (>= 2.37) [sh4]

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  dep: libc6 (>= 2.38) [not alpha, ia64, sh4]

• dep: libc6.1 (>= 2.34) [alpha]

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  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [arm64, ppc64el, s390x]

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  dep: libgcc-s1 (>= 3.4) [alpha, amd64, i386, mips64el, ppc64, riscv64, x32]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64, sh4]

  dep: libgcc-s1 (>= 4.3) [sparc64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

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• dep: libgcc-s4 (>= 4.1.1) [hppa]

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Download hilive

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	2.0a-4	481.4 kB	2,824.0 kB	[list of files]
amd64	2.0a-4	517.9 kB	2,377.0 kB	[list of files]
arm64	2.0a-4+b1	476.1 kB	2,434.0 kB	[list of files]
armel	2.0a-4	443.7 kB	2,199.0 kB	[list of files]
armhf	2.0a-4	457.5 kB	1,555.0 kB	[list of files]
hppa (unofficial port)	2.0a-4	474.7 kB	2,325.0 kB	[list of files]
i386	2.0a-4	526.7 kB	2,511.0 kB	[list of files]
ia64 (unofficial port)	2.0a-3+b3	612.9 kB	5,084.0 kB	[list of files]
m68k (unofficial port)	2.0a-4	385.9 kB	2,175.0 kB	[list of files]
mips64el	2.0a-4	472.6 kB	3,289.0 kB	[list of files]
ppc64 (unofficial port)	2.0a-4	489.8 kB	3,137.0 kB	[list of files]
ppc64el	2.0a-4	502.6 kB	2,881.0 kB	[list of files]
riscv64	2.0a-4	526.0 kB	1,893.0 kB	[list of files]
s390x	2.0a-4	492.3 kB	2,453.0 kB	[list of files]
sh4 (unofficial port)	2.0a-4	452.7 kB	2,049.0 kB	[list of files]
sparc64 (unofficial port)	2.0a-4	416.9 kB	3,151.0 kB	[list of files]
x32 (unofficial port)	2.0a-4+b1	508.1 kB	2,308.0 kB	[list of files]