Пакет: r-bioc-rsamtools (1.30.0-1) [debports]

[ Източник:  ]

GNU R binary alignment (BAM), variant call (BCF), or tabix file import

This package provides an interface to the 'samtools', 'bcftools', and 'tabix' utilities for manipulating SAM (Sequence Alignment / Map), binary variant call (BCF) and compressed indexed tab-delimited (tabix) files.

Други пакети, свързани с r-bioc-rsamtools

• dep: libc6 (>= 2.15)

  GNU C Library: Shared libraries
  също и виртуален пакет, предлаган от libc6-udeb

• dep: libgcc2 (>= 4.2.1)

  Пакетът не е наличен

• dep: libgomp1 (>= 4.2.1)

  GCC OpenMP (GOMP) support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: r-api-3.4

  Пакетът не е наличен

• dep: r-base-core (>= 3.4.2-2)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-biocgenerics (>= 0.1.3)

  generic functions for Bioconductor

• dep: r-bioc-biocparallel

  BioConductor facilities for parallel evaluation

• dep: r-bioc-biostrings (>= 2.37.1)

  GNU R string objects representing biological sequences

• dep: r-bioc-genomeinfodb (>= 1.1.3)

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicranges (>= 1.21.6)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges (>= 2.3.7)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-s4vectors (>= 0.13.8)

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-xvector (>= 0.15.1)

  BioConductor representation and manpulation of external sequences

• dep: r-cran-bitops

  GNU R package implementing bitwise operations

• dep: zlib1g (>= 1:1.2.3.3)

  compression library - runtime

• sug: r-bioc-genomicalignments

  BioConductor representation and manipulation of short genomic alignments

• sug: r-bioc-genomicfeatures

  GNU R tools for making and manipulating transcript centric annotations

• sug: r-bioc-shortread (>= 1.19.10)

  GNU R classes and methods for high-throughput short-read sequencing data

• sug: r-cran-runit

  GNU R package providing unit testing framework

Изтегляне на r-bioc-rsamtools

Изтегляне за всички налични архитектури

Архитектура	Големина на пакета	Големина след инсталиране	Файлове
m68k (неофициална архитектура)	3 206,0 кБ	5 170,0 кБ	[списък на файловете]