[ bullseye ]
[ sid ]
[ 原始碼： igdiscover ]
套件：igdiscover（0.11-4）
analyzes antibody repertoires to find new V genes
IgDiscover analyzes antibody repertoires and discovers new V genes from high-throughput sequencing reads. Heavy chains, kappa and lambda light chains are supported (to discover VH, VK and VL genes).
其他與 igdiscover 有關的套件
|
|
|
|
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- dep: python3-cutadapt
- Clean biological sequences from high-throughput sequencing reads (Python 3)
-
- dep: python3-matplotlib (>= 1.5.0)
- Python based plotting system in a style similar to Matlab
-
- dep: python3-numpy
- Fast array facility to the Python language (Python 3)
-
- dep: python3-pandas (>= 0.16.2)
- data structures for "relational" or "labeled" data
-
- dep: python3-ruamel.yaml
- Roundtrip YAML parser/emitter (Python 3 module)
-
- dep: python3-scipy (>= 0.16.1)
- scientific tools for Python 3
-
- dep: python3-seaborn (>= 0.9)
- statistical visualization library for Python3
-
- dep: python3-sqt
- SeQuencing Tools for biological DNA/RNA high-throughput data
-
- dep: python3-xopen (>= 0.3.2)
- Python3 module to open compressed files transparently
-
- sug: igdiscover-doc
- analyzes antibody repertoires to find new V genes - doc
-
- sug: snakemake
- pythonic workflow management system