[ 源代码： provean ]
软件包：provean（1.1.5+ds-3）
Protein Variation Effect Analyzer
PROVEAN (Protein Variation Effect Analyzer) is a software tool which predicts whether an amino acid substitution or indel has an impact on the biological function of a protein.
PROVEAN is useful for filtering sequence variants to identify nonsynonymous or indel variants that are predicted to be functionally important.
The performance of PROVEAN is comparable to popular tools such as SIFT or PolyPhen-2.
A fast computation approach to obtain pairwise sequence alignment scores enabled the generation of precomputed PROVEAN predictions for 20 single AA substitutions and a single AA deletion at every amino acid position of all protein sequences in human and mouse.
其他与 provean 有关的软件包
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- dep: cd-hit
- suite of programs designed to quickly group sequences
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- dep: libc6 (>= 2.38)
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
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- dep: libgcc-s1 (>= 3.0) [除 armel, armhf, riscv64]
- GCC 支持库
- dep: libgcc-s1 (>= 3.4) [riscv64]
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
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- dep: libstdc++6 (>= 13.1)
- GNU 标准 C++ 库，第3版
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- dep: ncbi-blast+
- next generation suite of BLAST sequence search tools
下载 provean
| 硬件架构 | 软件包大小 | 安装后大小 | 文件 |
|---|---|---|---|
| amd64 | 51.0 kB | 149.0 kB | [文件列表] |
| arm64 | 44.7 kB | 153.0 kB | [文件列表] |
| armel | 45.4 kB | 152.0 kB | [文件列表] |
| armhf | 47.3 kB | 152.0 kB | [文件列表] |
| i386 | 52.2 kB | 144.0 kB | [文件列表] |
| mips64el | 49.5 kB | 222.0 kB | [文件列表] |
| ppc64el | 49.2 kB | 153.0 kB | [文件列表] |
| riscv64 | 48.1 kB | 113.0 kB | [文件列表] |
| s390x | 50.3 kB | 141.0 kB | [文件列表] |