软件包：canu（2.2+dfsg-5）

[ 源代码： canu  ]

single molecule sequence assembler for genomes

Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION).

Canu is a hierarchical assembly pipeline which runs in four steps:

 * Detect overlaps in high-noise sequences using MHAP
 * Generate corrected sequence consensus
 * Trim corrected sequences
 * Assemble trimmed corrected sequences

其他与 canu 有关的软件包

• dep: gnuplot-nox

  Command-line driven interactive plotting program. No-X package
  同时作为一个虚包由这些包填实： gnuplot-qt, gnuplot-x11

  或者 gnuplot

  Command-line driven interactive plotting program.
  同时作为一个虚包由这些包填实： gnuplot-nox, gnuplot-qt, gnuplot-x11

• dep: libc6 (>= 2.34)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: libfilesys-df-perl

  Module to obtain filesystem disk space information

• dep: libgcc-s1 (>= 4.2)

  GCC 支持库

• dep: libgomp1 (>= 6)

  GCC OpenMP（GOMP）支持库

• dep: libsnappy1v5 (>= 1.1.10)

  fast compression/decompression library

• dep: libstdc++6 (>= 11)

  GNU 标准 C++ 库，第3版

• dep: mhap

  locality-sensitive hashing to detect long-read overlaps

• dep: perl

  拉里 沃尔的实用报表提取语言(Perl)

• sug: nanopolish

  consensus caller for nanopore sequencing data

下载 canu

下载可用于所有硬件架构的

硬件架构	软件包大小	安装后大小	文件
s390x	1,340.9 kB	13,853.0 kB	[文件列表]