软件包：libseqlib-dev（1.2.0+dfsg-11 以及其他的）

[ 源代码： libseqlib  ]

C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev)

C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.

This package contains the header files and static library.

标签: 软件开发: 函数库, 角色: 开发用函数库

其他与 libseqlib-dev 有关的软件包

• dep: libbwa-dev

  Burrows-Wheeler Aligner source files

• dep: libbz2-dev [sparc64]

  high-quality block-sorting file compressor library - development

• dep: libfml-dev

  development headers for libfml

• dep: libhts-dev

  development files for the HTSlib

• dep: libjsoncpp-dev

  library for reading and writing JSON for C++ (devel files)

• dep: liblzma-dev [sparc64]

  XZ-format compression library - development files

• dep: libseqlib2 (= 1.2.0+dfsg-11+b1) [ia64]

  C++ htslib/bwa-mem/fermi interface for interrogating sequence data

  dep: libseqlib2 (= 1.2.0+dfsg-11+b2) [除 ia64]

• dep: libssw-dev

  Development headers and static libraries for libssw
  同时作为一个虚包由这些包填实： libssw-dev

• dep: libunwind8-dev [ia64]

  本虚包由这些包填实： libunwind-dev

• dep: zlib1g-dev

  压缩库 - 开发文件

下载 libseqlib-dev

下载可用于所有硬件架构的

硬件架构	版本	软件包大小	安装后大小	文件
alpha （非官方移植版）	1.2.0+dfsg-11+b2	231.2 kB	1,610.0 kB	[文件列表]
amd64	1.2.0+dfsg-11+b2	216.1 kB	1,186.0 kB	[文件列表]
arm64	1.2.0+dfsg-11+b2	203.5 kB	1,191.0 kB	[文件列表]
armel	1.2.0+dfsg-11+b2	204.5 kB	1,077.0 kB	[文件列表]
armhf	1.2.0+dfsg-11+b2	206.3 kB	970.0 kB	[文件列表]
i386	1.2.0+dfsg-11+b2	230.5 kB	1,017.0 kB	[文件列表]
ia64 （非官方移植版）	1.2.0+dfsg-11+b1	264.6 kB	1,753.0 kB	[文件列表]
m68k （非官方移植版）	1.2.0+dfsg-11+b2	201.1 kB	988.0 kB	[文件列表]
mips64el	1.2.0+dfsg-11+b2	223.9 kB	1,393.0 kB	[文件列表]
ppc64 （非官方移植版）	1.2.0+dfsg-11+b2	218.1 kB	1,286.0 kB	[文件列表]
ppc64el	1.2.0+dfsg-11+b2	224.6 kB	1,273.0 kB	[文件列表]
riscv64	1.2.0+dfsg-11+b2	676.7 kB	6,552.0 kB	[文件列表]
s390x	1.2.0+dfsg-11+b2	210.7 kB	1,180.0 kB	[文件列表]
sh4 （非官方移植版）	1.2.0+dfsg-11+b2	238.4 kB	950.0 kB	[文件列表]
sparc64 （非官方移植版）	1.2.0+dfsg-11+b2	187.1 kB	1,166.0 kB	[文件列表]
x32 （非官方移植版）	1.2.0+dfsg-11+b2	215.7 kB	995.0 kB	[文件列表]