Paket: srst2 (0.1.8-1) [debports]

[ Kaynak:  ]

Short Read Sequence Typing for Bacterial Pathogens

This program is designed to take Illumina sequence data, a MLST database and/or a database of gene sequences (e.g. resistance genes, virulence genes, etc) and report the presence of STs and/or reference genes.

srst2 ile İlgili Diğer Paketler

• dep: bowtie2

  ultrafast memory-efficient short read aligner

• dep: cd-hit

  suite of programs designed to quickly group sequences

• dep: python

  Paket mevcut değil

• dep: python-biopython

  Python library for bioinformatics (implemented in Python 2)

• dep: python-scipy

  Paket mevcut değil

• dep: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

srst2 indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
x32 (resmi olmayan port)	58,6 kB	258,0 kB	[dosya listesi]