Paket: kissplice (2.1.0-1) [debports]

[ Kaynak:  ]

Detection of various kinds of polymorphisms in RNA-seq data

KisSplice is a piece of software that enables the analysis of RNA-seq data with or without a reference genome. It is an exact local transcriptome assembler that allows one to identify SNPs, indels and alternative splicing events. It can deal with an arbitrary number of biological conditions, and will quantify each variant in each condition. It has been tested on Illumina datasets of up to 1G reads. Its memory consumption is around 5Gb for 100M reads.

kissplice ile İlgili Diğer Paketler

• dep: libc6 (>= 2.17)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libgcc1 (>= 1:4.2.1)

  Paket mevcut değil

• dep: libstdc++6 (>= 4.6)

  GNU Standard C++ Library v3

• dep: python

  Paket mevcut değil

• dep: zlib1g (>= 1:1.2.3.4)

  compression library - runtime

kissplice indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
sh4 (resmi olmayan port)	1.282,1 kB	2.090,0 kB	[dosya listesi]