Pakket: kissplice (2.1.0-1) [debports]

[ Bron:  ]

Detection of various kinds of polymorphisms in RNA-seq data

KisSplice is a piece of software that enables the analysis of RNA-seq data with or without a reference genome. It is an exact local transcriptome assembler that allows one to identify SNPs, indels and alternative splicing events. It can deal with an arbitrary number of biological conditions, and will quantify each variant in each condition. It has been tested on Illumina datasets of up to 1G reads. Its memory consumption is around 5Gb for 100M reads.

Andere aan kissplice gerelateerde pakketten

• dep: libc6 (>= 2.17)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libgcc1 (>= 1:4.2.1)

  Pakket niet beschikbaar

• dep: libstdc++6 (>= 4.6)

  GNU Standard C++ Library v3

• dep: python

  Pakket niet beschikbaar

• dep: zlib1g (>= 1:1.2.3.4)

  compressiebibliotheek - programma's

kissplice downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
sh4 (unofficial port)	1.282,1 kB	2.090,0 kB	[overzicht]