Paket: bali-phy (4.0-1)

[ Kaynak: bali-phy  ]

Bayesian Inference of Alignment and Phylogeny

BAli-Phy estimates multiple sequence alignments and evolutionary trees from unaligned DNA, amino acid, or codon sequences. BAli-Phy uses MCMC to estimate evolutionary trees, positive selection, and branch lengths while averaging over alternative alignments. BAli-Phy can display alignment ambiguity graphically in an alignment uncertainty (AU) plot.

BAli-Phy can also estimate phylogenies from a fixed alignment (like MrBayes and BEAST) using substitution models like GTR+gamma. BAli-Phy automatically estimates relative rates for each gene.

bali-phy ile İlgili Diğer Paketler

• dep: libboost-chrono1.83.0t64 (>= 1.83.0)

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• dep: libboost-json1.83.0 (>= 1.83.0)

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• dep: libboost-program-options1.83.0 (>= 1.83.0)

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• dep: libboost-random1.83.0 (>= 1.83.0)

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• dep: libc6 (>= 2.38)

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  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libcairo2 (>= 1.4.10)

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• dep: libfmt10 (>= 10.1.1+ds1)

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• dep: libgcc-s1 (>= 7)

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• dep: libstdc++6 (>= 14)

  GNU Standard C++ Library v3

• dep: perl

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• dep: python3

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• rec: gnuplot

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  ayrıca şunun tarafından sağlanan bir sanal paket gnuplot-nox, gnuplot-qt, gnuplot-x11

• rec: r-base

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• sug: figtree

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• sug: seaview

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Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
i386	9.253,0 kB	51.011,0 kB	[dosya listesi]