Paket: libbio-samtools-perl (1.43-2)

[ Kaynak: libbio-samtools-perl  ]

Perl interface to SamTools library for DNA sequencing

Bio::SamTools provides a Perl interface to the libbam library for indexed and unindexed SAM/BAM sequence alignment databases. It provides support for retrieving information on individual alignments, read pairs, and alignment coverage information across large regions. It also provides callback functionality for calling SNPs and performing other base-by-base functions. Most operations are compatible with the BioPerl Bio::SeqFeatureI interface, allowing BAM files to be used as a backend to the GBrowse genome browser application.

Etiketler: Yazılım Geliştirme: Perl Geliştirme, Kitaplıklar, Geliştirildiği dil: implemented-in::c, implemented-in::perl, Rol: Geliştirme Kitaplığı, Paylaşılan Kitaplık

libbio-samtools-perl ile İlgili Diğer Paketler

• dep: libbio-perl-perl

  BioPerl core perl modules

• dep: libc6 (>= 2.15)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: perl (>= 5.28.1-4)

  Larry Wall's Practical Extraction and Report Language

• dep: perlapi-5.28.1

  sanal paketi sağlayan perl-base

• dep: zlib1g (>= 1:1.2.3.3)

  compression library - runtime

• enh: gbrowse

  GMOD Generic Genome Browser

• enh: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

libbio-samtools-perl indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
i386	205,2 kB	688,0 kB	[dosya listesi]