Paket: bali-phy (3.4+dfsg-1)

[ Kaynak: bali-phy  ]

Bayesian Inference of Alignment and Phylogeny

BAli-Phy estimates multiple sequence alignments and evolutionary trees from unaligned DNA, amino acid, or codon sequences. BAli-Phy uses MCMC to estimate evolutionary trees, positive selection, and branch lengths while averaging over alternative alignments. BAli-Phy can display alignment ambiguity graphically in an alignment uncertainty (AU) plot.

BAli-Phy can also estimate phylogenies from a fixed alignment (like MrBayes and BEAST) using substitution models like GTR+gamma. BAli-Phy automatically estimates relative rates for each gene.

bali-phy ile İlgili Diğer Paketler

• dep: libboost-chrono1.67.0

  C++ representation of time duration, time point, and clocks

• dep: libboost-filesystem1.67.0

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-program-options1.67.0

  program options library for C++

• dep: libboost-random1.67.0

  Boost Random Number Library

• dep: libboost-system1.67.0

  Operating system (e.g. diagnostics support) library

• dep: libc6 (>= 2.23)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libcairo2 (>= 1.4.10)

  Cairo 2D vector graphics library

• dep: libgcc1 (>= 1:3.4) [amd64]

  GCC support library

  dep: libgcc1 (>= 1:3.5) [armhf]

  dep: libgcc1 (>= 1:4.2) [arm64, i386]

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: perl

  Larry Wall's Practical Extraction and Report Language

• rec: gnuplot

  Command-line driven interactive plotting program.
  ayrıca şunun tarafından sağlanan bir sanal paket gnuplot-nox, gnuplot-qt, gnuplot-x11

• rec: r-base

  GNU R statistical computation and graphics system

• sug: figtree

  graphical phylogenetic tree viewer

• sug: seaview

  Multiplatform interface for sequence alignment and phylogeny

bali-phy indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	5.017,5 kB	25.561,0 kB	[dosya listesi]
arm64	4.682,4 kB	23.393,0 kB	[dosya listesi]
armhf	3.939,7 kB	15.849,0 kB	[dosya listesi]
i386	4.913,3 kB	25.392,0 kB	[dosya listesi]