Paket: bitseq (0.7.5+dfsg-6)

[ Kaynak: bitseq  ]

Bayesian Inference of Transcripts from Sequencing Data

BitSeq is an application for inferring expression levels of individual transcripts from sequencing (RNA-Seq) data and estimating differential expression (DE) between conditions. An advantage of this approach is the ability to account for both technical uncertainty and intrinsic biological variance in order to avoid false DE calls. The technical contribution to the uncertainty comes both from finite read-depth and the possibly ambiguous mapping of reads to multiple transcripts.

bitseq ile İlgili Diğer Paketler

• dep: libc6 (>= 2.29)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libgcc-s1 (>= 3.0) [amd64, i386, mipsel, s390x]

  GCC support library

  dep: libgcc-s1 (>= 3.4.4) [ppc64el]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [arm64, mips64el]

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-numpy

  Fast array facility to the Python 3 language

• dep: zlib1g (>= 1:1.2.3.3)

  compression library - runtime

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

bitseq indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	337,2 kB	1.927,0 kB	[dosya listesi]
arm64	298,0 kB	1.691,0 kB	[dosya listesi]
armel	282,4 kB	1.606,0 kB	[dosya listesi]
armhf	286,8 kB	1.158,0 kB	[dosya listesi]
i386	362,5 kB	2.022,0 kB	[dosya listesi]
mips64el	320,9 kB	2.167,0 kB	[dosya listesi]
mipsel	324,2 kB	2.080,0 kB	[dosya listesi]
ppc64el	343,5 kB	2.471,0 kB	[dosya listesi]
s390x	297,6 kB	1.955,0 kB	[dosya listesi]