套件：bitseq（0.7.5+dfsg-6）

[ 原始碼： bitseq  ]

Bayesian Inference of Transcripts from Sequencing Data

BitSeq is an application for inferring expression levels of individual transcripts from sequencing (RNA-Seq) data and estimating differential expression (DE) between conditions. An advantage of this approach is the ability to account for both technical uncertainty and intrinsic biological variance in order to avoid false DE calls. The technical contribution to the uncertainty comes both from finite read-depth and the possibly ambiguous mapping of reads to multiple transcripts.

其他與 bitseq 有關的套件

• dep: libc6 (>= 2.29)

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

• dep: libgcc-s1 (>= 3.0) [amd64, i386, mipsel, s390x]

  GCC 支援函式庫

  dep: libgcc-s1 (>= 3.4.4) [ppc64el]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [arm64, mips64el]

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-numpy

  Fast array facility to the Python 3 language

• dep: zlib1g (>= 1:1.2.3.3)

  壓縮函式庫 - 跑程式時用(runtime)

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

下載 bitseq

下載可用於所有硬體架構的

硬體架構	套件大小	安裝後大小	檔案
amd64	337。2 kB	1，927。0 kB	[檔案列表]
arm64	298。0 kB	1，691。0 kB	[檔案列表]
armel	282。4 kB	1，606。0 kB	[檔案列表]
armhf	286。8 kB	1，158。0 kB	[檔案列表]
i386	362。5 kB	2，022。0 kB	[檔案列表]
mips64el	320。9 kB	2，167。0 kB	[檔案列表]
mipsel	324。2 kB	2，080。0 kB	[檔案列表]
ppc64el	343。5 kB	2，471。0 kB	[檔案列表]
s390x	297。6 kB	1，955。0 kB	[檔案列表]