Package: blixem (4.44.1+dfsg-6 and others)

[ Source: seqtools  ]

interactive browser of sequence alignments

Blixem is an interactive browser of sequence alignments that have been stacked up in a "master-slave" multiple alignment; it is not a 'true' multiple alignment but a 'one-to-many' alignment.

 * Overview section showing the positions of genes and alignments around
   the alignment window
 * Detail section showing the actual alignment of protein or nucleotide
   sequences to the genomic DNA sequence.
 * View alignments against both strands of the reference sequence.
 * View sequences in nucleotide or protein mode; in protein mode, Blixem
   will display the three-frame translation of the reference sequence.
 * Residues are highlighted in different colours depending on whether
   they are an exact match, conserved substitution or mismatch.
 * Gapped alignments are supported, with insertions and deletions being
   highlighted in the match sequence.
 * Matches can be sorted and filtered.
 * SNPs and other variations can be highlighted in the reference
   sequence.
 * Poly(A) tails can be displayed and poly(A) signals highlighted in the
   reference sequence.

Tags: Interface Toolkit: GTK

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  dep: libc6 (>= 2.17) [arm64, ppc64el]

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• dep: libgbtools0 (>= 4.44.1+dfsg)

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• dep: libgcc-s1 (>= 3.0) [not armel, armhf]

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  dep: libgcc-s1 (>= 3.5) [armel, armhf]

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Download blixem

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
amd64	4.44.1+dfsg-6+b1	1,358.0 kB	2,256.0 kB	[list of files]
arm64	4.44.1+dfsg-6+b1	1,320.3 kB	2,202.0 kB	[list of files]
armel	4.44.1+dfsg-6+b1	1,299.1 kB	2,072.0 kB	[list of files]
armhf	4.44.1+dfsg-6+b1	1,305.6 kB	1,820.0 kB	[list of files]
i386	4.44.1+dfsg-6+b1	1,372.7 kB	2,424.0 kB	[list of files]
mips64el	4.44.1+dfsg-6+b1	1,343.4 kB	2,639.0 kB	[list of files]
mipsel	4.44.1+dfsg-6+b1	1,349.7 kB	2,561.0 kB	[list of files]
ppc64el	4.44.1+dfsg-6+b1	1,358.2 kB	2,676.0 kB	[list of files]
s390x	4.44.1+dfsg-6+b1	1,321.3 kB	2,306.0 kB	[list of files]