Pacote: blixem (4.44.1+dfsg-7 e outros)

[ Fonte: seqtools  ]

interactive browser of sequence alignments

Blixem is an interactive browser of sequence alignments that have been stacked up in a "master-slave" multiple alignment; it is not a 'true' multiple alignment but a 'one-to-many' alignment.

 * Overview section showing the positions of genes and alignments around
   the alignment window
 * Detail section showing the actual alignment of protein or nucleotide
   sequences to the genomic DNA sequence.
 * View alignments against both strands of the reference sequence.
 * View sequences in nucleotide or protein mode; in protein mode, Blixem
   will display the three-frame translation of the reference sequence.
 * Residues are highlighted in different colours depending on whether
   they are an exact match, conserved substitution or mismatch.
 * Gapped alignments are supported, with insertions and deletions being
   highlighted in the match sequence.
 * Matches can be sorted and filtered.
 * SNPs and other variations can be highlighted in the reference
   sequence.
 * Poly(A) tails can be displayed and poly(A) signals highlighted in the
   reference sequence.

Etiquetas: Kit de ferramentas de interface: GTK

Outros pacotes relacionados a blixem

• dep: libc6 (>= 2.34)

  GNU Biblioteca C: Bibliotecas compartilhadas
  também um pacote virtual fornecido por libc6-udeb

• dep: libcairo2 (>= 1.2.4)

  biblioteca gráfica de vetores 2D Cairo

• dep: libcurl4 (>= 7.16.2)

  biblioteca de transferência de URL do lado cliente de fácil uso (versão com OpenSSL)

• dep: libgbtools0 (>= 4.44.1+dfsg)

  library for visualising sequence alignments

• dep: libgcc-s1 (>= 3.0) [não armel, armhf]

  Biblioteca de suporte GCC

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libglib2.0-0 (>= 2.35.9)

  biblioteca GLib de rotinas C

• dep: libgtk2.0-0 (>= 2.14.0)

  GTK graphical user interface library - old version

• dep: libpango-1.0-0 (>= 1.14.0)

  layout e renderização de texto internacionalizado

• dep: libsqlite3-0 (>= 3.5.9)

  biblioteca compartilhada SQLite 3

• dep: libstdc++6 (>= 5.2)

  Biblioteca C++ padrão da GNU v3

Download de blixem

Baixe para todas as arquiteturas disponíveis

Arquitetura	Versão	Tamanho do pacote	Tamanho instalado	Arquivos
amd64	4.44.1+dfsg-7+b2	1,358.3 kB	2,248.0 kB	[lista de arquivos]
arm64	4.44.1+dfsg-7+b2	1,320.1 kB	2,290.0 kB	[lista de arquivos]
armel	4.44.1+dfsg-7+b2	1,297.8 kB	2,160.0 kB	[lista de arquivos]
armhf	4.44.1+dfsg-7+b2	1,303.9 kB	1,904.0 kB	[lista de arquivos]
i386	4.44.1+dfsg-7+b2	1,374.3 kB	2,416.0 kB	[lista de arquivos]
mips64el	4.44.1+dfsg-7+b2	1,343.5 kB	2,699.0 kB	[lista de arquivos]
mipsel	4.44.1+dfsg-7+b2	1,345.3 kB	2,620.0 kB	[lista de arquivos]
ppc64el	4.44.1+dfsg-7+b2	1,356.2 kB	2,676.0 kB	[lista de arquivos]
s390x	4.44.1+dfsg-7+b2	1,321.1 kB	2,302.0 kB	[lista de arquivos]