Paketti: blixem (4.44.1+dfsg-6 ja muut)

[ Source: seqtools  ]

interactive browser of sequence alignments

Blixem is an interactive browser of sequence alignments that have been stacked up in a "master-slave" multiple alignment; it is not a 'true' multiple alignment but a 'one-to-many' alignment.

 * Overview section showing the positions of genes and alignments around
   the alignment window
 * Detail section showing the actual alignment of protein or nucleotide
   sequences to the genomic DNA sequence.
 * View alignments against both strands of the reference sequence.
 * View sequences in nucleotide or protein mode; in protein mode, Blixem
   will display the three-frame translation of the reference sequence.
 * Residues are highlighted in different colours depending on whether
   they are an exact match, conserved substitution or mismatch.
 * Gapped alignments are supported, with insertions and deletions being
   highlighted in the match sequence.
 * Matches can be sorted and filtered.
 * SNPs and other variations can be highlighted in the reference
   sequence.
 * Poly(A) tails can be displayed and poly(A) signals highlighted in the
   reference sequence.

Tagit: Interface Toolkit: GTK

Muut pakettiin blixem liittyvät paketit

• dep: libc6 (>= 2.14) [amd64]

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.7) [ei amd64, arm64, ppc64el]

• dep: libcairo2 (>= 1.2.4)

  Cairo 2D vector graphics library

• dep: libcurl4 (>= 7.16.2)

  easy-to-use client-side URL transfer library (OpenSSL flavour)

• dep: libgbtools0 (>= 4.44.1+dfsg)

  library for visualising sequence alignments

• dep: libgcc-s1 (>= 3.0) [ei armel, armhf]

  GCC:n apukirjasto

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libglib2.0-0 (>= 2.35.9)

  GLib library of C routines

• dep: libgtk2.0-0 (>= 2.14.0)

  GTK graphical user interface library - old version

• dep: libpango-1.0-0 (>= 1.14.0)

  Layout and rendering of internationalized text

• dep: libsqlite3-0 (>= 3.5.9)

  SQLite 3 (jaettu kirjasto)

• dep: libstdc++6 (>= 5.2)

  GNU standardi C++ -kirjasto, versio 3

Imuroi blixem

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
amd64	4.44.1+dfsg-6+b1	1,358.0 kt	2,256.0 kt	[tiedostoluettelo]
arm64	4.44.1+dfsg-6+b1	1,320.3 kt	2,202.0 kt	[tiedostoluettelo]
armel	4.44.1+dfsg-6+b1	1,299.1 kt	2,072.0 kt	[tiedostoluettelo]
armhf	4.44.1+dfsg-6+b1	1,305.6 kt	1,820.0 kt	[tiedostoluettelo]
i386	4.44.1+dfsg-6+b1	1,372.7 kt	2,424.0 kt	[tiedostoluettelo]
mips64el	4.44.1+dfsg-6+b1	1,343.4 kt	2,639.0 kt	[tiedostoluettelo]
mipsel	4.44.1+dfsg-6+b1	1,349.7 kt	2,561.0 kt	[tiedostoluettelo]
ppc64el	4.44.1+dfsg-6+b1	1,358.2 kt	2,676.0 kt	[tiedostoluettelo]
s390x	4.44.1+dfsg-6+b1	1,321.3 kt	2,306.0 kt	[tiedostoluettelo]