Pakket: bwa (0.7.18-1)

[ Bron: bwa  ]

Burrows-Wheeler Aligner

BWA is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome. It consists of three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. The first algorithm is designed for Illumina sequence reads up to 100bp, while the rest two for longer sequences ranged from 70bp to 1Mbp. BWA-MEM and BWA-SW share similar features such as long-read support and split alignment, but BWA-MEM, which is the latest, is generally recommended for high-quality queries as it is faster and more accurate. BWA-MEM also has better performance than BWA-backtrack for 70-100bp Illumina reads.

Tags: Biology: Proteins, Field: Biology, field::biology:bioinformatics, implemented-in::c, User Interface: Command Line, interface::text-mode, role::program, Purpose: Analysing, Comparing

Andere aan bwa gerelateerde pakketten

• dep: libc6 (>= 2.34)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: zlib1g (>= 1:1.1.4) [niet armel, armhf]

  compressiebibliotheek - programma's

  dep: zlib1g (>= 1:1.2.3.3) [armel, armhf]

• rec: perl

  Larry Wall's Practical Extraction and Report Language

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

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Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	206,9 kB	459,0 kB	[overzicht]
arm64	193,6 kB	447,0 kB	[overzicht]
armel	194,1 kB	438,0 kB	[overzicht]
armhf	193,3 kB	326,0 kB	[overzicht]
i386	231,1 kB	522,0 kB	[overzicht]
mips64el	204,7 kB	526,0 kB	[overzicht]
ppc64el	230,2 kB	575,0 kB	[overzicht]
riscv64	214,6 kB	375,0 kB	[overzicht]
s390x	222,8 kB	511,0 kB	[overzicht]