Pakket: r-cran-bio3d (2.4-4-1 en anderen)

[ Bron: r-cran-bio3d  ]

GNU R package for biological structure analysis

The bio3d package contains utilities to process, organize and explore protein structure, sequence and dynamics data. Features include the ability to read and write structure, sequence and dynamic trajectory data, perform atom summaries, atom selection, re-orientation, superposition, rigid core identification, clustering, torsion analysis, distance matrix analysis, structure and sequence conservation analysis, and principal component analysis (PCA). In addition, various utility functions are provided to enable the statistical and graphical power of the R environment to work with biological sequence and structural data.

Andere aan r-cran-bio3d gerelateerde pakketten

• dep: libc6 (>= 2.14) [amd64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.16) [x32]

  dep: libc6 (>= 2.17) [ppc64el]

  dep: libc6 (>= 2.2) [hppa]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.35) [sh4]

  dep: libc6 (>= 2.38) [arm64]

  dep: libc6 (>= 2.4) [armel, armhf, i386, m68k, mips64el, ppc64, s390x, sparc64]

• dep: libc6.1 (>= 2.1.3) [alpha]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

  dep: libc6.1 (>= 2.35) [ia64]

• dep: libgcc-s1 (>= 3.0) [niet armel, armhf, hppa, ia64, m68k]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support bibliotheek

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support bibliotheek

• dep: libstdc++6 (>= 13.1) [riscv64]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 14) [arm64]

  dep: libstdc++6 (>= 5.2) [niet arm64, riscv64]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: r-api-4.0

  virtueel pakket geboden door r-base-core

• dep: r-base-core (>= 4.2.1-3) [niet arm64, riscv64]

  GNU R core of statistical computation and graphics system

• dep: r-cran-rcpp

  GNU R package for Seamless R and C++ Integration

• dep: zlib1g (>= 1:1.1.4)

  compressiebibliotheek - programma's

• rec: clustalo

  General-purpose multiple sequence alignment program for proteins

• rec: dssp

  protein secondary structure assignment based on 3D structure

• rec: muscle

  Multiple alignment program of protein sequences

• rec: mustang

  multiple structural alignment of proteins

• rec: r-cran-testthat (>= 0.9.1)

  GNU R testsuite

• sug: r-bioc-biostrings

  GNU R string objects representing biological sequences

• sug: r-cran-bigmemory

  Manage Massive Matrices with Shared Memory and Memory-Mapped Files

• sug: r-cran-httr

  GNU R tools for working with URLs and HTTP

• sug: r-cran-igraph

  GNU R network analysis and visualization

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-lattice

  GNU R package for 'Trellis' graphics

• sug: r-cran-ncdf4

  GNU R interface to Unidata netCDF format data files

• sug: r-cran-rcurl

  GNU R General network (HTTP/FTP/...) client interface

• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• sug: r-cran-xml

  GNU R package for XML parsing and generation

r-cran-bio3d downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	2.4-4-1	2.873,8 kB	4.040,0 kB	[overzicht]
amd64	2.4-4-1	2.880,1 kB	3.940,0 kB	[overzicht]
arm64	2.4-4-1+b1	2.897,4 kB	3.996,0 kB	[overzicht]
armel	2.4-4-1	2.866,9 kB	3.910,0 kB	[overzicht]
armhf	2.4-4-1	2.867,9 kB	3.911,0 kB	[overzicht]
hppa (unofficial port)	2.4-4-1	2.874,2 kB	3.966,0 kB	[overzicht]
i386	2.4-4-1	2.877,2 kB	3.950,0 kB	[overzicht]
ia64 (unofficial port)	2.4-4-1	2.900,0 kB	4.187,0 kB	[overzicht]
m68k (unofficial port)	2.4-4-1	2.875,6 kB	3.928,0 kB	[overzicht]
mips64el	2.4-4-1	2.871,8 kB	3.989,0 kB	[overzicht]
ppc64 (unofficial port)	2.4-4-1	2.875,8 kB	4.043,0 kB	[overzicht]
ppc64el	2.4-4-1	2.872,6 kB	3.975,0 kB	[overzicht]
riscv64	2.4-4-1+b1	2.886,5 kB	3.904,0 kB	[overzicht]
s390x	2.4-4-1	2.875,1 kB	3.943,0 kB	[overzicht]
sh4 (unofficial port)	2.4-4-1	2.895,1 kB	3.974,0 kB	[overzicht]
sparc64 (unofficial port)	2.4-4-1	2.863,1 kB	4.749,0 kB	[overzicht]
x32 (unofficial port)	2.4-4-1	2.885,1 kB	3.932,0 kB	[overzicht]