Pakket: phast (1.6+dfsg-6 en anderen)

[ Bron: phast  ]

phylogenetic analysis with space/time models

PHAST is a software package for comparative and evolutionary genomics. It consists of about half a dozen major programs, plus more than a dozen utilities for manipulating sequence alignments, phylogenetic trees, and genomic annotations. For the most part, PHAST focuses on two kinds of applications: the identification of novel functional elements, including protein-coding exons and evolutionarily conserved sequences; and statistical phylogenetic modeling, including estimation of model parameters, detection of signatures of selection, and reconstruction of ancestral sequences.

PHAST does not support phylogeny reconstruction or sequence alignment, and it is designed for use with DNA sequences only (see Comparison).

Andere aan phast gerelateerde pakketten

• dep: libblas3 [sparc64]

  Basic Linear Algebra Reference implementations, shared library

  of libblas.so.3

  virtueel pakket geboden door libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libc6 (>= 2.34) [niet alpha, ia64, sh4]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.39) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: liblapack3

  Library of linear algebra routines 3 - shared version

  of liblapack.so.3

  virtueel pakket geboden door libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libpcre2-8-0 (>= 10.22)

  New Perl Compatible Regular Expression Library- 8 bit runtime files

• dep: libtmglib3 (>= 3.12.0) [sparc64]

  test matrix generators of LAPACK - shared version

phast downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	1.6+dfsg-6	2.861,9 kB	28.907,0 kB	[overzicht]
amd64	1.6+dfsg-6	2.971,1 kB	25.691,0 kB	[overzicht]
arm64	1.6+dfsg-6	2.815,6 kB	25.262,0 kB	[overzicht]
armel	1.6+dfsg-6	2.606,3 kB	23.241,0 kB	[overzicht]
armhf	1.6+dfsg-6	2.504,3 kB	17.389,0 kB	[overzicht]
hppa (unofficial port)	1.6+dfsg-6	2.684,6 kB	24.904,0 kB	[overzicht]
i386	1.6+dfsg-6	3.017,5 kB	27.259,0 kB	[overzicht]
ia64 (unofficial port)	1.6+dfsg-5	3.541,5 kB	55.315,0 kB	[overzicht]
m68k (unofficial port)	1.6+dfsg-6	2.644,1 kB	21.361,0 kB	[overzicht]
mips64el	1.6+dfsg-6	2.856,8 kB	29.065,0 kB	[overzicht]
ppc64 (unofficial port)	1.6+dfsg-6	3.153,4 kB	32.686,0 kB	[overzicht]
ppc64el	1.6+dfsg-6	3.174,3 kB	31.278,0 kB	[overzicht]
riscv64	1.6+dfsg-6	2.951,9 kB	20.510,0 kB	[overzicht]
s390x	1.6+dfsg-6	2.839,6 kB	28.115,0 kB	[overzicht]
sh4 (unofficial port)	1.6+dfsg-6	2.568,3 kB	21.587,0 kB	[overzicht]
sparc64 (unofficial port)	1.6+dfsg-6	2.803,5 kB	38.774,0 kB	[overzicht]
x32 (unofficial port)	1.6+dfsg-6	2.955,5 kB	25.541,0 kB	[overzicht]