Pakket: meryl (0~20150903+r2013-9 en anderen)

[ Bron: kmer  ]

in- and out-of-core kmer counting and utilities

meryl computes the kmer content of genomic sequences. Kmer content is represented as a list of kmers and the number of times each occurs in the input sequences. The kmer can be restricted to only the forward kmer, only the reverse kmer, or the canonical kmer (lexicographically smaller of the forward and reverse kmer at each location). Meryl can report the histogram of counts, the list of kmers and their counts, or can perform mathematical and set operations on the processed data files.

This package is part of the Kmer suite.

Andere aan meryl gerelateerde pakketten

• dep: libc6 (>= 2.38) [niet alpha, ia64, sh4]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.40) [sh4]

• dep: libc6.1 (>= 2.36) [ia64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

  dep: libc6.1 (>= 2.38) [alpha]

• dep: libgcc-s1 (>= 3.0) [amd64, arm64, mips64el, ppc64, ppc64el, s390x, x32]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sparc64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [i386, ia64, sh4]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support bibliotheek

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support bibliotheek

• dep: libstdc++6 (>= 4.1.1) [niet ia64]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 5) [ia64]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• sug: gridengine-client

  Utilities for Grid Engine queue management

meryl downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	0~20150903+r2013-9+b1	209,2 kB	1.706,0 kB	[overzicht]
amd64	0~20150903+r2013-9+b1	195,8 kB	1.458,0 kB	[overzicht]
arm64	0~20150903+r2013-9+b1	189,4 kB	1.572,0 kB	[overzicht]
armel	0~20150903+r2013-9+b1	201,0 kB	1.635,0 kB	[overzicht]
armhf	0~20150903+r2013-9+b1	200,7 kB	1.379,0 kB	[overzicht]
hppa (unofficial port)	0~20150903+r2013-9+b1	281,6 kB	2.022,0 kB	[overzicht]
i386	0~20150903+r2013-9+b1	233,7 kB	1.835,0 kB	[overzicht]
ia64 (unofficial port)	0~20150903+r2013-8+b3	268,4 kB	2.565,0 kB	[overzicht]
m68k (unofficial port)	0~20150903+r2013-9+b1	244,2 kB	1.939,0 kB	[overzicht]
mips64el	0~20150903+r2013-9+b1	213,3 kB	1.821,0 kB	[overzicht]
ppc64 (unofficial port)	0~20150903+r2013-9+b1	203,3 kB	1.834,0 kB	[overzicht]
ppc64el	0~20150903+r2013-9+b1	209,9 kB	1.765,0 kB	[overzicht]
riscv64	0~20150903+r2013-9+b1	213,9 kB	1.286,0 kB	[overzicht]
s390x	0~20150903+r2013-9+b1	178,7 kB	1.483,0 kB	[overzicht]
sh4 (unofficial port)	0~20150903+r2013-9+b1	280,7 kB	1.891,0 kB	[overzicht]
sparc64 (unofficial port)	0~20150903+r2013-9+b1	179,6 kB	7.480,0 kB	[overzicht]
x32 (unofficial port)	0~20150903+r2013-9+b1	199,3 kB	1.455,0 kB	[overzicht]