Package: t-coffee (13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 and others)
Links for t-coffee
Debian Resources:
Download Source Package t-coffee:
- [t-coffee_13.45.0.4846264+really13.41.0.28bdc39+dfsg-1.dsc]
- [t-coffee_13.45.0.4846264+really13.41.0.28bdc39+dfsg.orig.tar.xz]
- [t-coffee_13.45.0.4846264+really13.41.0.28bdc39+dfsg-1.debian.tar.xz]
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Steffen Moeller (QA Page)
- Andreas Tille (QA Page)
- Étienne Mollier (QA Page)
External Resources:
- Homepage [www.tcoffee.org]
Similar packages:
Multiple Sequence Alignment
T-Coffee is a multiple sequence alignment package. Given a set of sequences (Proteins or DNA), T-Coffee generates a multiple sequence alignment. Version 2.00 and higher can mix sequences and structures.
T-Coffee allows the combination of a collection of multiple/pairwise, global or local alignments into a single model. It can also estimate the level of consistency of each position within the new alignment with the rest of the alignments. See the pre-print for more information
T-Coffee has a special called M-Coffee that makes it possible to combine the output of many multiple sequence alignment packages. In its published version, it uses MUSCLE, PROBCONS, POA, DiAlign-TS, MAFFT, Clustal W, PCMA and T-Coffee. A special version has been made for Debian, DM-Coffee, that uses only free software by replacing Clustal W by Kalign. Using the 8 Methods of M-Coffee can sometimes be a bit heavy. You can use a subset of your favorite methods if you prefer.
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Download t-coffee
Architecture | Version | Package Size | Installed Size | Files |
---|---|---|---|---|
alpha (unofficial port) | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 997.0 kB | 3,340.0 kB | [list of files] |
amd64 | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 1,007.5 kB | 2,715.0 kB | [list of files] |
arm64 | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 894.1 kB | 2,634.0 kB | [list of files] |
armel | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 846.5 kB | 2,569.0 kB | [list of files] |
armhf | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 857.3 kB | 1,929.0 kB | [list of files] |
hppa (unofficial port) | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 910.9 kB | 2,720.0 kB | [list of files] |
i386 | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 1,010.5 kB | 3,033.0 kB | [list of files] |
ia64 (unofficial port) | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 1,208.2 kB | 5,405.0 kB | [list of files] |
m68k (unofficial port) | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 893.9 kB | 2,825.0 kB | [list of files] |
mips64el | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 950.6 kB | 3,380.0 kB | [list of files] |
ppc64 (unofficial port) | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 1,020.1 kB | 3,466.0 kB | [list of files] |
ppc64el | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 1,063.4 kB | 3,402.0 kB | [list of files] |
riscv64 | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1+b1 | 996.7 kB | 2,295.0 kB | [list of files] |
s390x | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 921.2 kB | 2,974.0 kB | [list of files] |
sh4 (unofficial port) | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 1,073.0 kB | 2,570.0 kB | [list of files] |
sparc64 (unofficial port) | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 835.5 kB | 3,150.0 kB | [list of files] |
x32 (unofficial port) | 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 | 1,010.6 kB | 2,710.0 kB | [list of files] |