Package: murasaki (1.68.6-13 and others)

[ Source: murasaki  ]

homology detection tool across multiple large genomes

Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.

Murasaki is an anchor alignment software, which is

 * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
   40 nodes: 52 wall minutes))
 * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
   Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
 * unlimited pattern length
 * repeat tolerant
 * intelligent noise reduction

Other Packages Related to murasaki

• dep: libboost-filesystem1.83.0 (>= 1.83.0)

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-iostreams1.83.0 (>= 1.83.0)

  Boost.Iostreams Library

• dep: libc6 (>= 2.34)

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0) [not armel, armhf, riscv64]

  GCC támogató programkönyvtár

  dep: libgcc-s1 (>= 3.4) [riscv64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• dep: murasaki-common

  homology detection tool across multiple large genomes (common files)

Download murasaki

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
amd64	1.68.6-13+b5	611.1 kB	4,244.0 kB	[list of files]
arm64	1.68.6-13+b5	533.9 kB	4,319.0 kB	[list of files]
armel	1.68.6-13+b5	444.2 kB	3,315.0 kB	[list of files]
armhf	1.68.6-13+b5	457.2 kB	2,339.0 kB	[list of files]
i386	1.68.6-13+b5	621.8 kB	4,071.0 kB	[list of files]
mips64el	1.68.6-13+b5	578.5 kB	5,874.0 kB	[list of files]
ppc64el	1.68.6-13+b4	599.9 kB	5,536.0 kB	[list of files]
riscv64	1.68.6-13+b3	572.8 kB	3,211.0 kB	[list of files]
s390x	1.68.6-13+b4	596.5 kB	4,799.0 kB	[list of files]