Package: density-fitness (1.1.2-1 and others)

[ Source: density-fitness  ]

Calculates per-residue electron density scores

The program density-fitness calculates electron density metrics, for main- (includes Cβ atom) and side-chain atoms of individual residues.

For this calculation, the program uses the structure model in either PDB or mmCIF format and the electron density from the 2mFo-DFc and mFo-DFc maps. If these maps are not readily available, the MTZ file and model can be used to calculate maps clipper. Density-fitness support both X-ray and electron diffraction data.

This program is essentially a reimplementation of edstats, a program available from the CCP4 suite. However, the output now contains only the RSR, SRSR and RSCC fields as in edstats with the addition of EDIAm and OPIA and no longer requires pre-calculated map coefficients.

Other Packages Related to density-fitness

• dep: libboost-iostreams1.74.0 (>= 1.74.0) [hppa]

  Boost.Iostreams Library

• dep: libboost-program-options1.74.0 (>= 1.74.0) [hppa]

  program options library for C++

• dep: libc6 (>= 2.2) [hppa]

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.38) [not alpha, hppa, ia64, sh4]

  dep: libc6 (>= 2.40) [sh4]

• dep: libc6.1 (>= 2.36) [ia64]

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.38) [alpha]

• dep: libcifpp1 (>= 1.0.1) [hppa]

  Package not available

• dep: libcifpp5 (>= 5.0.7.1) [ia64, x32]

  Library files for libcifpp

• dep: libcifpp7 (>= 7.0.7) [alpha]

  Library files for libcifpp

  dep: libcifpp7 (>= 7.0.9) [not alpha, hppa, ia64, x32]

• dep: libclipper2 (>= 2.1.20201109)

  object oriented library for crystallographic computing

• dep: libgcc-s1 (>= 3.0) [not armel, armhf, hppa, ia64, m68k]

  GCC támogató programkönyvtár

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC támogató programkönyvtár

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC támogató programkönyvtár

• dep: libpdb-redo1 (>= 1.0.2-3~) [hppa]

  Package not available

• dep: libpdb-redo3 (>= 3.0.5) [ia64, x32]

  Library file for libpdb-redo

  dep: libpdb-redo3 (>= 3.1.5) [alpha]

  dep: libpdb-redo3 (>= 3.2.1) [not alpha, hppa, ia64, x32]

• dep: libstdc++6 (>= 11) [hppa, ia64]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 13.1) [not hppa, ia64]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: libzeep5.1 (>= 5.1.4) [hppa]

  Library file for libzeep

  dep: libzeep5.1 (>= 5.1.8) [not hppa]

• dep: zlib1g (>= 1:1.2.2) [ia64, x32]

  tömörítő könyvtár - futásidejű

  dep: zlib1g (>= 1:1.2.3.4) [not hppa, ia64, x32]

Download density-fitness

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	1.0.12-2	479.1 kB	5,911.0 kB	[list of files]
amd64	1.1.2-1	483.0 kB	5,869.0 kB	[list of files]
arm64	1.1.2-1	477.6 kB	5,909.0 kB	[list of files]
armel	1.1.2-1	475.9 kB	5,845.0 kB	[list of files]
armhf	1.1.2-1	475.9 kB	5,845.0 kB	[list of files]
hppa (unofficial port)	1.0.0-4	104.9 kB	359.0 kB	[list of files]
i386	1.1.2-1	485.8 kB	5,865.0 kB	[list of files]
ia64 (unofficial port)	1.0.8-4	461.7 kB	5,675.0 kB	[list of files]
m68k (unofficial port)	1.1.2-1	480.3 kB	5,853.0 kB	[list of files]
mips64el	1.1.2-1	483.2 kB	5,918.0 kB	[list of files]
ppc64 (unofficial port)	1.1.2-1	483.1 kB	5,909.0 kB	[list of files]
ppc64el	1.1.2-1	483.3 kB	5,909.0 kB	[list of files]
riscv64	1.1.2-1	481.7 kB	5,837.0 kB	[list of files]
s390x	1.1.2-1	481.5 kB	5,865.0 kB	[list of files]
sh4 (unofficial port)	1.1.2-1	487.8 kB	5,845.0 kB	[list of files]
sparc64 (unofficial port)	1.1.2-1	476.7 kB	6,745.0 kB	[list of files]
x32 (unofficial port)	1.0.8-4+b1	477.6 kB	5,843.0 kB	[list of files]