Package: sibsim4 (0.20-5)

[ Source: sibsim4  ]

align expressed RNA sequences on a DNA template

The SIBsim4 project is based on sim4, which is a program designed to align an expressed DNA sequence with a genomic sequence, allowing for introns. SIBsim4 is a fairly extensive rewrite of the original code with the following goals:

 * speed improvement;
 * allow large, chromosome scale, DNA sequences to be used;
 * provide more detailed output about splice types;
 * provide more detailed output about polyA sites;
 * misc code cleanups and fixes.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::TODO, use::comparing, Searching, Supports Format: works-with-format::TODO, works-with-format::plaintext, Works with: Need an extra tag

Other Packages Related to sibsim4

• dep: libc6 (>= 2.14) [amd64]

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [not amd64, arm64, ppc64el]

Download sibsim4

Download for all available architectures

Architecture	Package Size	Installed Size	Files
amd64	29.7 kB	73.0 kB	[list of files]
arm64	28.1 kB	73.0 kB	[list of files]
armel	27.5 kB	72.0 kB	[list of files]
armhf	26.2 kB	56.0 kB	[list of files]
i386	30.8 kB	80.0 kB	[list of files]
mips64el	29.3 kB	79.0 kB	[list of files]
mipsel	28.4 kB	78.0 kB	[list of files]
ppc64el	31.9 kB	85.0 kB	[list of files]
s390x	30.5 kB	77.0 kB	[list of files]