Paketti: ampliconnoise (1.29-15 ja muut)

[ Source: ampliconnoise  ]

removal of noise from 454 sequenced PCR amplicons

AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:

Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences

Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.

Tagit: Role: Program

Muut pakettiin ampliconnoise liittyvät paketit

• dep: libc6 (>= 2.34)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: libgsl28 (>= 2.8+dfsg)

  GNU Scientific Library (GSL) -- library package

• dep: libmpich12 [armel, armhf, i386]

  Shared libraries for MPICH

• dep: libopenmpi40 (>= 5.0.6) [ei armel, armhf, i386]

  high performance message passing library -- shared library

• dep: mafft

  Multiple alignment program for amino acid or nucleotide sequences

• rec: mpi-default-bin

  Standard MPI runtime programs (metapackage)

Imuroi ampliconnoise

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
amd64	1.29-15+b1	1,084.5 kt	2,052.0 kt	[tiedostoluettelo]
arm64	1.29-15+b1	1,073.3 kt	2,400.0 kt	[tiedostoluettelo]
armel	1.29-15	1,064.2 kt	1,966.0 kt	[tiedostoluettelo]
armhf	1.29-15	1,059.0 kt	1,834.0 kt	[tiedostoluettelo]
i386	1.29-15	1,081.3 kt	2,046.0 kt	[tiedostoluettelo]
mips64el	1.29-15+b1	1,072.8 kt	2,422.0 kt	[tiedostoluettelo]
ppc64el	1.29-15+b1	1,092.7 kt	2,592.0 kt	[tiedostoluettelo]
riscv64	1.29-15+b1	1,079.0 kt	1,912.0 kt	[tiedostoluettelo]
s390x	1.29-15+b1	1,097.6 kt	2,108.0 kt	[tiedostoluettelo]