Paketti: ampliconnoise (1.29-9)

[ Source: ampliconnoise  ]

removal of noise from 454 sequenced PCR amplicons

AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:

Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences

Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.

Tagit: Role: Program

Muut pakettiin ampliconnoise liittyvät paketit

• dep: libc6 (>= 2.29)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: libgsl25 (>= 2.6)

  GNU Scientific Library (GSL) -- library package

• dep: libopenmpi3 (>= 4.0.4)

  high performance message passing library -- shared library

• dep: mafft

  Multiple alignment program for amino acid or nucleotide sequences

• rec: openmpi-bin

  high performance message passing library -- binaries

Imuroi ampliconnoise

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	1,080.6 kt	2,036.0 kt	[tiedostoluettelo]
arm64	1,073.3 kt	1,960.0 kt	[tiedostoluettelo]
armel	1,065.4 kt	1,955.0 kt	[tiedostoluettelo]
armhf	1,061.2 kt	1,819.0 kt	[tiedostoluettelo]
i386	1,078.5 kt	2,011.0 kt	[tiedostoluettelo]
mips64el	1,073.7 kt	2,022.0 kt	[tiedostoluettelo]
mipsel	1,070.4 kt	1,973.0 kt	[tiedostoluettelo]
ppc64el	1,093.8 kt	2,592.0 kt	[tiedostoluettelo]
s390x	1,073.6 kt	2,012.0 kt	[tiedostoluettelo]