Paketti: fastqtl (2.184+dfsg-7 ja muut)

[ Source: fastqtl  ]

Quantitative Trait Loci (QTL) mapper in cis for molecular phenotypes

The goal of FastQTL is to identify single-nucleotide polymorphisms (SNPs) which are significantly associated with various molecular phenotypes (i.e. expression of known genes, cytosine methylation levels, etc). It performs scans for all possible phenotype-variant pairs in cis (i.e. variants located within a specific window around a phenotype). FastQTL implements a new permutation scheme (Beta approximation) to accurately and rapidly correct for multiple-testing at both the genotype and phenotype levels.

Tagit: Field: Biology, Bioinformatics, User Interface: interface::commandline, role::program, Purpose: Analysing

Muut pakettiin fastqtl liittyvät paketit

• dep: libblas3

  Basic Linear Algebra Reference implementations, shared library

  tai libblas.so.3

  näennäispaketti, jonka toteuttaa libatlas3-base, libblas3, libblis3-openmp, libblis3-pthread, libblis3-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libboost-iostreams1.74.0 (>= 1.74.0)

  Boost.Iostreams -kirjasto

• dep: libboost-program-options1.74.0 (>= 1.74.0)

  program options library for C++

• dep: libc6 (>= 2.29)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: libgcc-s1 (>= 3.0) [ei armel, armhf]

  GCC:n apukirjasto

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libgsl25 (>= 2.6)

  GNU Scientific Library (GSL) -- library package

• dep: libhts3 (>= 1.10)

  C library for high-throughput sequencing data formats

• dep: libstdc++6 (>= 5.2) [ei mipsel]

  GNU standardi C++ -kirjasto, versio 3

  dep: libstdc++6 (>= 9) [mipsel]

• dep: r-mathlib

  GNU R standalone mathematics library

• sug: fastqtl-doc

  QTL mapper in cis for molecular phenotypes - documentation

Imuroi fastqtl

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
amd64	2.184+dfsg-7+b4	195.7 kt	669.0 kt	[tiedostoluettelo]
arm64	2.184+dfsg-7+b4	172.3 kt	617.0 kt	[tiedostoluettelo]
armel	2.184+dfsg-7+b4	161.1 kt	576.0 kt	[tiedostoluettelo]
armhf	2.184+dfsg-7+b4	164.0 kt	436.0 kt	[tiedostoluettelo]
i386	2.184+dfsg-7+b4	200.3 kt	676.0 kt	[tiedostoluettelo]
mips64el	2.184+dfsg-7+b4	169.6 kt	752.0 kt	[tiedostoluettelo]
mipsel	2.184+dfsg-7+b4	171.3 kt	731.0 kt	[tiedostoluettelo]
ppc64el	2.184+dfsg-7+b4	197.6 kt	761.0 kt	[tiedostoluettelo]
s390x	2.184+dfsg-7+b4	166.8 kt	657.0 kt	[tiedostoluettelo]