Package: bcftools (1.20-2 and others)

[ Source: bcftools  ]

genomic variant calling and manipulation of VCF/BCF files

BCFtools is a set of utilities that manipulate variant calls in the Variant Call Format (VCF) and its binary counterpart BCF. All commands work transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed.

Tags: Implemented in: C, Role: Program

Other Packages Related to bcftools

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libhts3t64 (>= 1.17)

  C library for high-throughput sequencing data formats

• dep: sse2-support [i386]

  CPU feature checking - require SSE2

• rec: perl

  Larry Wall's Practical Extraction and Report Language

• rec: python3-gffutils

  Work with GFF and GTF files in a flexible database framework

• rec: python3-matplotlib

  Python based plotting system in a style similar to Matlab

• sug: python3

  interactive high-level object-oriented language (default python3 version)

• sug: python3-numpy

  Fast array facility to the Python language (Python 3)

• sug: texlive-latex-recommended

  TeX Live: LaTeX recommended packages

Download bcftools

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
amd64	1.20-2	742.1 kB	2,632.0 kB	[list of files]
arm64	1.20-2+b1	677.4 kB	4,101.0 kB	[list of files]
armel	1.20-2	656.6 kB	2,359.0 kB	[list of files]
armhf	1.20-2	654.9 kB	1,824.0 kB	[list of files]
i386	1.20-2	784.4 kB	2,728.0 kB	[list of files]
mips64el	1.20-2	676.8 kB	4,355.0 kB	[list of files]
ppc64el	1.20-2	777.8 kB	4,610.0 kB	[list of files]
riscv64	1.20-2	735.9 kB	2,184.0 kB	[list of files]
s390x	1.20-2	766.6 kB	2,739.0 kB	[list of files]