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[ Source: rdkit  ]

Package: python3-rdkit (202409.2-2 and others)

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Collection of cheminformatics and machine-learning software

RDKit is a Python/C++ based cheminformatics and machine-learning software environment. Features Include:

 * Chemical reaction handling and transforms
 * Substructure searching with SMARTS
 * Canonical SMILES
 * Molecule-molecule alignment
 * Large number of molecular descriptors, including topological,
   compositional, EState, SlogP/SMR, VSA and Feature-map vectors
 * Fragmentation using RECAP rules
 * 2D coordinate generation and depiction, including constrained depiction
 * 3D coordinate generation using geometry embedding
 * UFF and MMFF94 forcefields
 * Chirality support, including calculation of (R/S) stereochemistry codes
 * 2D pharmacophore searching
 * Fingerprinting, including Daylight-like, atom pairs, topological
   torsions, Morgan algorithm and MACCS keys
 * Calculation of shape similarity
 * Multi-molecule maximum common substructure
 * Machine-learning via clustering and information theory algorithms
 * Gasteiger-Marsili partial charge calculation

File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit binary format.

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Download python3-rdkit

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 202309.3-4 4,105.1 kB28,954.0 kB [list of files]
amd64 202409.2-2 4,387.2 kB26,830.0 kB [list of files]
arm64 202409.2-2 4,078.4 kB27,804.0 kB [list of files]
armel 202409.2-2 3,722.5 kB23,117.0 kB [list of files]
armhf 202409.2-2 3,833.0 kB20,469.0 kB [list of files]
hppa (unofficial port) 202009.5-2 3,843.8 kB24,156.0 kB [list of files]
i386 202409.2-2 4,441.0 kB25,865.0 kB [list of files]
m68k (unofficial port) 202409.2-2 4,153.6 kB24,555.0 kB [list of files]
mips64el 202409.2-2 3,988.7 kB30,268.0 kB [list of files]
ppc64 (unofficial port) 202409.2-2 4,170.0 kB32,025.0 kB [list of files]
ppc64el 202409.2-2 4,219.2 kB30,297.0 kB [list of files]
riscv64 202409.2-2 4,302.6 kB24,082.0 kB [list of files]
s390x 202409.2-2 4,185.1 kB26,078.0 kB [list of files]
sparc64 (unofficial port) 202309.3-6 3,957.3 kB67,971.0 kB [list of files]