Package: python3-pyspoa (0.2.1-1 and others)

[ Source: python-pyspoa  ]

Python bindings to spoa

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

This package presents Python bindings for the spoa library

Other Packages Related to python3-pyspoa

• dep: libc6 (>= 2.32) [not alpha, ia64, sh4]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.40) [sh4]

• dep: libc6.1 (>= 2.32) [alpha]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [not armel, armhf, hppa, ia64, m68k]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support library

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support library

• dep: libspoa7.0.0 (>= 4.0.8) [ia64]

  SIMD partial order alignment library

  dep: libspoa7.0.0 (>= 4.1.4) [not ia64]

• dep: libstdc++6 (>= 13.1) [ia64, m68k]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 14) [not ia64, m68k]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: python3 (<< 3.13) [ia64]

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.14) [not ia64]

  dep: python3 (>= 3.11~) [ia64]

  dep: python3 (>= 3.12~) [not ia64]

Download python3-pyspoa

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	0.0.10-1+b3	74.5 kB	413.0 kB	[list of files]
amd64	0.2.1-1	78.6 kB	337.0 kB	[list of files]
arm64	0.2.1-1	71.0 kB	409.0 kB	[list of files]
armel	0.2.1-1	72.4 kB	407.0 kB	[list of files]
armhf	0.2.1-1	72.4 kB	279.0 kB	[list of files]
hppa (unofficial port)	0.2.1-1	78.0 kB	347.0 kB	[list of files]
i386	0.2.1-1	84.5 kB	327.0 kB	[list of files]
ia64 (unofficial port)	0.0.10-1+b1	90.3 kB	498.0 kB	[list of files]
m68k (unofficial port)	0.2.1-1	75.3 kB	295.0 kB	[list of files]
mips64el	0.2.1-1	72.2 kB	423.0 kB	[list of files]
ppc64 (unofficial port)	0.2.1-1	79.3 kB	409.0 kB	[list of files]
ppc64el	0.2.1-1	79.3 kB	409.0 kB	[list of files]
riscv64	0.2.1-1	78.8 kB	257.0 kB	[list of files]
s390x	0.2.1-1	77.4 kB	337.0 kB	[list of files]
sh4 (unofficial port)	0.2.1-1	94.8 kB	409.0 kB	[list of files]
sparc64 (unofficial port)	0.2.1-1	64.2 kB	2,083.0 kB	[list of files]
x32 (unofficial port)	0.2.1-1	78.4 kB	311.0 kB	[list of files]