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[ Source: spoa  ]

Package: libspoa7.0.0 (4.1.4-2 and others)

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SIMD partial order alignment library

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

This package contains the shared library.

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Download libspoa7.0.0

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 4.1.4-2 67.2 kB209.0 kB [list of files]
amd64 4.1.4-2+b1 72.4 kB311.0 kB [list of files]
arm64 4.1.4-2+b1 52.1 kB146.0 kB [list of files]
armel 4.1.4-2+b1 56.4 kB161.0 kB [list of files]
armhf 4.1.4-2+b1 60.4 kB125.0 kB [list of files]
hppa (unofficial port) 4.1.4-2+b1 77.5 kB191.0 kB [list of files]
i386 4.1.4-2+b1 90.5 kB505.0 kB [list of files]
ia64 (unofficial port) 4.1.4-1 76.8 kB290.0 kB [list of files]
m68k (unofficial port) 4.1.4-2+b1 58.9 kB169.0 kB [list of files]
mips64el 4.1.4-2+b1 66.8 kB214.0 kB [list of files]
ppc64 (unofficial port) 4.1.4-2+b1 72.3 kB210.0 kB [list of files]
ppc64el 4.1.4-2+b1 63.1 kB209.0 kB [list of files]
riscv64 4.1.4-2+b1 72.7 kB141.0 kB [list of files]
s390x 4.1.4-2+b1 77.3 kB210.0 kB [list of files]
sh4 (unofficial port) 4.1.4-2 76.6 kB208.0 kB [list of files]
sparc64 (unofficial port) 4.1.4-2+b1 63.9 kB1,045.0 kB [list of files]
x32 (unofficial port) 4.1.4-2+b1 59.6 kB153.0 kB [list of files]