all options
buster  ] [  bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ Source: htslib  ]

Package: tabix (1.16+ds-3)

Links for tabix

Screenshot

Debian Resources:

Download Source Package htslib:

Maintainers:

External Resources:

Similar packages:

generic indexer for TAB-delimited genome position files

Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosome), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name.

This package is built from the HTSlib source, and provides the bgzip, htsfile, and tabix tools.

Tags: Implemented in: C, Role: Program, Science: science::calculation, use::calculating, Supports Format: HTML, Hypertext Markup Language, Works with: Text

Other Packages Related to tabix

  • depends
  • recommends
  • suggests
  • enhances

Download tabix

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 446.3 kB2,185.0 kB [list of files]
arm64 417.1 kB2,177.0 kB [list of files]
armel 378.0 kB2,046.0 kB [list of files]
armhf 378.6 kB1,534.0 kB [list of files]
i386 489.4 kB2,478.0 kB [list of files]
mips64el 411.8 kB2,541.0 kB [list of files]
mipsel 425.5 kB2,532.0 kB [list of files]
ppc64el 481.2 kB2,945.0 kB [list of files]
s390x 404.3 kB2,293.0 kB [list of files]