Package: spoa (4.0.8-1)

[ Source: spoa  ]

SIMD partial order alignment tool

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

Other Packages Related to spoa

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0) [not armel, armhf]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libspoa7.0.0 (>= 4.0.5) [amd64]

  SIMD partial order alignment library

  dep: libspoa7.0.0 (>= 4.0.8) [not amd64]

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

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Architecture	Package Size	Installed Size	Files
amd64	35.2 kB	74.0 kB	[list of files]
arm64	34.2 kB	98.0 kB	[list of files]
armel	33.1 kB	97.0 kB	[list of files]
armhf	32.6 kB	97.0 kB	[list of files]
i386	35.6 kB	73.0 kB	[list of files]
mips64el	34.8 kB	100.0 kB	[list of files]
mipsel	34.7 kB	99.0 kB	[list of files]
ppc64el	36.0 kB	98.0 kB	[list of files]
s390x	34.2 kB	74.0 kB	[list of files]