Package: cufflinks (2.2.1+dfsg.1-3 and others) [non-free]

[ Source: cufflinks  ]

Transcript assembly, differential expression and regulation for RNA-Seq

Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples. It accepts aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts. Cufflinks then estimates the relative abundances of these transcripts based on how many reads support each one.

Tags: Biology: Nucleic Acids, Field: Biology, field::biology:bioinformatics, implemented-in::c++, Role: Program, Works with: Biological Sequence

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Download cufflinks

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
amd64	2.2.1+dfsg.1-3+b1	1,467.3 kB	10,248.0 kB	[list of files]
arm64	2.2.1+dfsg.1-3+b1	1,365.4 kB	9,782.0 kB	[list of files]
armhf	2.2.1+dfsg.1-3+b1	1,079.9 kB	6,034.0 kB	[list of files]
i386	2.2.1+dfsg.1-3+b1	1,494.9 kB	10,392.0 kB	[list of files]