[ 原始碼： megadepth ]
套件：megadepth（1.2.0-4 以及其他的）
computes coverage from BigWig and BAM sequencing files
A major concern for the interpretation of DNA and RNA (!) sequencing is the number of reads that cover a particular area. This package has interesting statistics for the distinction of coding and non-coding parts of the genome and knows how to interpret transcripts that span multiple exons.
This package is a successor of the program 'bamcount'.
其他與 megadepth 有關的套件
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- dep: libbigwig0t64 (>= 0.4.6)
- C library for handling bigWig files
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- dep: libc6 (>= 2.34)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC 支援函式庫
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- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
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- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
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- sug: r-bioc-megadepth
- BioCOnductor BigWig and BAM related utilities